Basic Information:

  VIRBase ID:  

VHID00120335

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          ADAMTS4:  NM_005099     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	ADAMTS4
miRBase Accession/Entrez ID	MIMAT0014693	9507
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ADAMTS-2//ADAMTS-4//ADMP-1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ADAMTS4	chr1:161164730(-) A-I      intronic chr1:161164755(-) A-I      intronic chr1:161160080(-) A-I      3'UTR chr1:161160071(-) A-I      3'UTR chr1:161160057(-) A-I      3'UTR chr1:161160015(-) A-I      3'UTR chr1:161160060(-) A-I      3'UTR chr1:161164728(-) A-I      intronic chr1:161160026(-) A-I      3'UTR chr1:161159753(-) A-I      3'UTR chr1:161160043(-) A-I      3'UTR chr1:161159980(-) A-I      3'UTR chr1:161160056(-) A-I      3'UTR chr1:161159781(-) A-I      3'UTR chr1:161160081(-) A-I      3'UTR chr1:161160179(-) A-I      3'UTR chr1:161159815(-) A-I      3'UTR chr1:161159826(-) A-I      3'UTR chr1:161160091(-) A-I      3'UTR chr1:161160181(-) A-I      3'UTR chr1:161159853(-) A-I      3'UTR chr1:161160191(-) A-I      3'UTR chr1:161160203(-) A-I      3'UTR chr1:161164304(-) A-I      intronic chr1:161159854(-) A-I      3'UTR chr1:161160246(-) A-I      3'UTR chr1:161160256(-) A-I      3'UTR chr1:161160021(-) A-I      3'UTR chr1:161164392(-) A-I      intronic chr1:161160259(-) A-I      3'UTR chr1:161160264(-) A-I      3'UTR chr1:161159741(-) A-I      3'UTR chr1:161164743(-) A-I      intronic chr1:161164716(-) A-I      intronic chr1:161159960(-) A-I      3'UTR chr1:161164429(-) A-I      intronic chr1:161164272(-) A-I      intronic chr1:161164269(-) A-I      intronic chr1:161160031(-) A-I      3'UTR chr1:161164287(-) A-I      intronic chr1:161164291(-) A-I      intronic chr1:161164738(-) A-I      intronic chr1:161164468(-) A-I      intronic chr1:161164430(-) A-I      intronic chr1:161160019(-) A-I      3'UTR chr1:161164445(-) A-I      intronic chr1:161164296(-) A-I      intronic chr1:161159898(-) A-I      3'UTR chr1:161164751(-) A-I      intronic chr1:161164452(-) A-I      intronic chr1:161164762(-) A-I      intronic chr1:161165062(-) A-I      intronic chr1:161165151(-) A-I      intronic chr1:161164406(-) A-I      intronic chr1:161165164(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ADAMTS4	chr1:161155093-161155094(-) m6A 3'UTR       22575960 chr1:161155179-161155180(-) m6A 3'UTR       22575960 chr1:161155210-161155211(-) m6A 3'UTR       22575960 chr1:161160808-161160809(-) m6A 3'UTR       25456834 chr1:161160837-161160838(-) m6A 3'UTR       25456834 chr1:161160884-161160885(-) m6A 3'UTR       25456834 chr1:161160994-161160995(-) m6A CDS       24284625//25456834//24981863 chr1:161161063-161161064(-) m6A CDS       24284625//25456834//24981863 chr1:161161133-161161134(-) m6A CDS       24284625//25456834 chr1:161168121-161168122(-) m6A CDS       25456834 chr1:161168542-161168543(-) m6A 5'UTR       25456834 chr1:161168588-161168589(-) m6A 5'UTR       25456834 chr1:161168617-161168618(-) m6A 5'UTR       25456834 chr1:161168666-161168667(-) m6A 5'UTR       25456834//24981863 chr1:161168682-161168683(-) m6A 5'UTR       25456834//24981863 chr1:161168723-161168724(-) m6A 5'UTR       25456834//24981863 chr1:161168749-161168750(-) m6A 5'UTR       25456834//24981863 chr1:161168758-161168759(-) m1A 5'UTR       26863196 chr1:161168776-161168777(-) m6A 5'UTR       25456834//24981863 chr1:161168782-161168783(-) m6A 5'UTR       25456834//24981863 chr1:161168798-161168799(-) m6A 5'UTR       25456834//24981863 chr1:161168817-161168818(-) m6A 5'UTR       25456834 chr1:161168825-161168826(-) m6A 5'UTR       25456834 chr1:161168837-161168838(-) m6A 5'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ADAMTS4	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: ADAMTS4

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg