Basic Information:

  VIRBase ID:  

VHID00120179

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          TAGLN2:  NM_003564     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	TAGLN2
miRBase Accession/Entrez ID	MIMAT0014693	8407
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HA1756

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TAGLN2	chr1:159888141-159888142(-) m6A 3'UTR       24284625 chr1:159888191-159888192(-) m6A 3'UTR       24284625//22575960 chr1:159888344-159888345(-) m6A 3'UTR       24284625//27773535//22575960 chr1:159888372-159888373(-) m6A 3'UTR       24284625//27773535//22575960 chr1:159888377-159888378(-) m6A 3'UTR       24284625//27773535//22575960 chr1:159888707-159888708(-) m6A CDS//exon       26404942 chr1:159889047-159889048(-) m6A exon//intron       24284625 chr1:159889159-159889160(-) m6A CDS//exon       24284625//26404942 chr1:159889461-159889462(-) m6A CDS//exon       24284625//26404942 chr1:159889468-159889469(-) m6A CDS//exon       24284625//26404942 chr1:159890138-159890139(-) m6A CDS//exon       22575960 chr1:159890147-159890148(-) m6A CDS//exon       22575960 chr1:159890239-159890240(-) m6A CDS//exon       24284625//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:159890284-159890285(-) m6A CDS//exon       24284625//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:159893286-159893287(-) m6A 5'UTR//intron       24284625//25456834//24981863//28052920//27371828//22608085 chr1:159893301-159893302(-) m6A 5'UTR//intron       24284625//25456834//24981863//28052920//27371828//22608085 chr1:159894918-159894919(-) m6A 5'UTR//intron       - chr1:159894984-159894985(-) m6A 5'UTR//intron       24981863 chr1:159894992-159894993(-) m6A 5'UTR//intron       24981863 chr1:159895016-159895017(-) m6A 5'UTR//intron       24981863 chr1:159895332-159895333(-) m6A 5'UTR       24981863 chr1:159895380-159895381(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TAGLN2	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: TAGLN2

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg