Basic Information:

  VIRBase ID:  

VHID00119938

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          RPL29:  NM_000992     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	RPL29
miRBase Accession/Entrez ID	MIMAT0014693	6159
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HIP//HUMRPL29//L29//RPL29_3_370//RPL29P10

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RPL29	chr3:52027655-52027656(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//22608085 chr3:52027735-52027736(-) m6A 3'UTR       24284625//24981863//27773535//22575960 chr3:52027743-52027744(-) m6A 3'UTR       24284625//24981863//27773535//22575960 chr3:52027847-52027848(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22575960 chr3:52027911-52027912(-) Y 3'UTR//CDS       26075521 chr3:52029090-52029091(-) m6A CDS//exon       - chr3:52029199-52029200(-) m6A exon//intron       - chr3:52029376-52029377(-) m6A exon//intron       - chr3:52029382-52029383(-) m6A exon//intron       - chr3:52029396-52029397(-) m6A exon//intron       - chr3:52029408-52029409(-) m6A exon//intron       27773535 chr3:52029460-52029461(-) m6A CDS//exon       24284625//27773535 chr3:52029478-52029479(-) m6A 5'UTR//exon       24284625//27773535 chr3:52029797-52029798(-) m6A 5'UTR//intron       24284625//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RPL29	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: RPL29

Evidence Support:

Prediction-Evidence	cRep//RNAHybrid
Support Database	RepTar//VmiReg