Basic Information:

  VIRBase ID:  

VHID00119886

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          PSD:  NR_073110     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	PSD
miRBase Accession/Entrez ID	MIMAT0014693	5662
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EFA6//EFA6A//PSD1//TYL

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PSD	chr10:104163983(-) A-I      intronic chr10:104166354(-) A-I      intronic chr10:104163862(-) A-I      intronic chr10:104166269(-) A-I      intronic chr10:104172395(-) A-I      intronic chr10:104166483(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PSD	chr10:104163034-104163035(-) m6A CDS       27371828 chr10:104163073-104163074(-) m6A CDS       27371828 chr10:104163726-104163727(-) m6A CDS       27371828 chr10:104165119-104165120(-) m6A CDS//exon       27371828 chr10:104165185-104165186(-) m6A CDS//exon       27371828 chr10:104165350-104165351(-) m6A exon//intron       27371828 chr10:104168752-104168753(-) m6A exon//intron       24209618 chr10:104172224-104172225(-) m6A CDS       27773536 chr10:104172251-104172252(-) m6A CDS       27371828//27773536 chr10:104172284-104172285(-) m6A CDS       25456834//27371828//27773536 chr10:104172296-104172297(-) m6A CDS       25456834//27371828//27773536 chr10:104172328-104172329(-) m6A CDS       25456834//27371828//27773536 chr10:104173558-104173559(-) m6A CDS       25456834//27371828 chr10:104173643-104173644(-) m6A CDS       25456834//27371828 chr10:104173683-104173684(-) m6A CDS       25456834//27371828 chr10:104178745-104178746(-) m6A 5'UTR//intron       25456834 chr10:104178785-104178786(-) m6A 5'UTR//intron       25456834 chr10:104178846-104178847(-) m6A 5'UTR//intron       25456834 chr10:104178869-104178870(-) m6A 5'UTR//intron       25456834 chr10:104181006-104181007(-) m6A exon       24284625//25456834//24981863//22608085 chr10:104181111-104181112(-) m6A exon       24284625//25456834//22608085 chr10:104181163-104181164(-) m6A exon       24284625//25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PSD	Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: PSD

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg