Basic Information:

  VIRBase ID:  

VHID00119723

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          MYH10:  NM_005964     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	MYH10
miRBase Accession/Entrez ID	MIMAT0014693	4628
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NMMHC-IIB//NMMHCB

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MYH10	chr17:8521880(-) A-I      intronic chr17:8441721(-) A-I      intronic chr17:8443482(-) A-I      intronic chr17:8523128(-) A-I      intronic chr17:8481598(-) A-I      intronic chr17:8441684(-) A-I      intronic chr17:8528204(-) A-I      intronic chr17:8439893(-) A-I      intronic chr17:8439925(-) A-I      intronic chr17:8439937(-) A-I      intronic chr17:8401352(-) A-I      intronic chr17:8481628(-) A-I      intronic chr17:8439951(-) A-I      intronic chr17:8401357(-) A-I      intronic chr17:8401362(-) A-I      intronic chr17:8401412(-) A-I      intronic chr17:8481618(-) A-I      intronic chr17:8401425(-) A-I      intronic chr17:8481633(-) A-I      intronic chr17:8521821(-) A-I      intronic chr17:8521829(-) A-I      intronic chr17:8440109(-) A-I      intronic chr17:8443446(-) A-I      intronic chr17:8480917(-) A-I      intronic chr17:8480935(-) A-I      intronic chr17:8440041(-) A-I      intronic chr17:8440113(-) A-I      intronic chr17:8481590(-) A-I      intronic chr17:8481591(-) A-I      intronic chr17:8481608(-) A-I      intronic chr17:8481623(-) A-I      intronic chr17:8482545(-) A-I      intronic chr17:8482521(-) A-I      intronic chr17:8481681(-) A-I      intronic chr17:8481672(-) A-I      intronic chr17:8411533(-) A-I      intronic chr17:8411542(-) A-I      intronic chr17:8411561(-) A-I      intronic chr17:8411575(-) A-I      intronic chr17:8439995(-) A-I      intronic chr17:8481657(-) A-I      intronic chr17:8481653(-) A-I      intronic chr17:8481646(-) A-I      intronic chr17:8440005(-) A-I      intronic chr17:8411207(-) A-I      intronic chr17:8529639(-) A-I      intronic chr17:8521594(-) A-I      intronic chr17:8518582(-) A-I      intronic chr17:8517872(-) A-I      intronic chr17:8517810(-) A-I      intronic chr17:8517801(-) A-I      intronic chr17:8517797(-) A-I      intronic chr17:8517740(-) A-I      intronic chr17:8517722(-) A-I      intronic chr17:8508943(-) A-I      intronic chr17:8483400(-) A-I      intronic chr17:8483376(-) A-I      intronic chr17:8440073(-) A-I      intronic chr17:8440078(-) A-I      intronic chr17:8483369(-) A-I      intronic chr17:8483363(-) A-I      intronic chr17:8482551(-) A-I      intronic chr17:8392896(-) A-I      intronic chr17:8421566(-) A-I      intronic chr17:8528363(-) A-I      intronic chr17:8441661(-) A-I      intronic chr17:8421616(-) A-I      intronic chr17:8518449(-) A-I      intronic chr17:8523196(-) A-I      intronic chr17:8529071(-) A-I      intronic chr17:8481701(-) A-I      intronic chr17:8429267(-) A-I      intronic chr17:8521839(-) A-I      intronic chr17:8528919(-) A-I      intronic chr17:8528206(-) A-I      intronic chr17:8419134(-) A-I      intronic chr17:8483412(-) A-I      intronic chr17:8529825(-) A-I      intronic chr17:8440111(-) A-I      intronic chr17:8401507(-) A-I      intronic chr17:8517891(-) A-I      intronic chr17:8482457(-) A-I      intronic chr17:8401438(-) A-I      intronic chr17:8529072(-) A-I      intronic chr17:8508807(-) A-I      intronic chr17:8419141(-) A-I      intronic chr17:8508819(-) A-I      intronic chr17:8421485(-) A-I      intronic chr17:8443350(-) A-I      intronic chr17:8411693(-) A-I      intronic chr17:8427587(-) A-I      intronic chr17:8411671(-) A-I      intronic chr17:8528908(-) A-I      intronic chr17:8443472(-) A-I      intronic chr17:8483388(-) A-I      intronic chr17:8521696(-) A-I      intronic chr17:8420433(-) A-I      intronic chr17:8518446(-) A-I      intronic chr17:8481765(-) A-I      intronic chr17:8411640(-) A-I      intronic chr17:8411620(-) A-I      intronic chr17:8518448(-) A-I      intronic chr17:8528350(-) A-I      intronic chr17:8481636(-) A-I      intronic chr17:8419157(-) A-I      intronic chr17:8406435(-) A-I      intronic chr17:8420212(-) A-I      intronic chr17:8443436(-) A-I      intronic chr17:8528375(-) A-I      intronic chr17:8414834(-) A-I      intronic chr17:8421518(-) A-I      intronic chr17:8528421(-) A-I      intronic chr17:8517884(-) A-I      intronic chr17:8508967(-) A-I      intronic chr17:8528197(-) A-I      intronic chr17:8420426(-) A-I      intronic chr17:8521830(-) A-I      intronic chr17:8493812(-) A-I      intronic chr17:8482473(-) A-I      intronic chr17:8399093(-) A-I      intronic chr17:8401483(-) A-I      intronic chr17:8518590(-) A-I      intronic chr17:8421519(-) A-I      intronic chr17:8508950(-) A-I      intronic chr17:8483362(-) A-I      intronic chr17:8528447(-) A-I      intronic chr17:8517709(-) A-I      intronic chr17:8525366(-) A-I      intronic chr17:8421612(-) A-I      intronic chr17:8508798(-) A-I      intronic chr17:8411166(-) A-I      intronic chr17:8528218(-) A-I      intronic chr17:8521838(-) A-I      intronic chr17:8521634(-) A-I      intronic chr17:8505646(-) A-I      intronic chr17:8401476(-) A-I      intronic chr17:8481799(-) A-I      intronic chr17:8401482(-) A-I      intronic chr17:8421603(-) A-I      intronic chr17:8482485(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MYH10	chr17:8402098(-) T-C intron -    22484847 chr17:8420467(-) A-T intron -    22484847 chr17:8443472(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MYH10	chr17:8377547-8377548(-) m6A 3'UTR       27773535 chr17:8377557-8377558(-) m6A 3'UTR       27773535 chr17:8377635-8377636(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr17:8377652-8377653(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr17:8377696-8377697(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr17:8377720-8377721(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr17:8377802-8377803(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr17:8377808-8377809(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr17:8377871-8377872(-) m6A 3'UTR       24284625 chr17:8377970-8377971(-) m6A 3'UTR       24284625//22608085 chr17:8377986-8377987(-) m6A 3'UTR       24284625//24981863//22608085 chr17:8378011-8378012(-) m6A 3'UTR       24284625//24981863//22575960//22608085 chr17:8378048-8378049(-) m6A 3'UTR       24284625//24981863//22575960//22608085 chr17:8378063-8378064(-) m6A 3'UTR       24284625//24981863//22575960//22608085 chr17:8378138-8378139(-) m6A 3'UTR       24284625//24981863//22575960//22608085 chr17:8378298-8378299(-) m6A 3'UTR       24284625//24981863//27371828//22608085 chr17:8378349-8378350(-) m6A 3'UTR       24284625//24981863//27371828//27773536//22575960//22608085 chr17:8378369-8378370(-) m6A 3'UTR       24284625//24981863//27371828//22575960//22608085 chr17:8378458-8378459(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr17:8378554-8378555(-) Tm 3'UTR       - chr17:8378593-8378594(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22608085 chr17:8378651-8378652(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22608085 chr17:8378658-8378659(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22608085 chr17:8378668-8378669(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22608085 chr17:8378730-8378731(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr17:8378822-8378823(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr17:8378834-8378835(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr17:8378844-8378845(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr17:8378857-8378858(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr17:8378904-8378905(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr17:8378917-8378918(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr17:8378928-8378929(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr17:8378962-8378963(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr17:8379086-8379087(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr17:8379162-8379163(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr17:8380202-8380203(-) m6A CDS       24284625//27773535//27371828//27773536//22575960 chr17:8380261-8380262(-) m6A CDS       24284625//24209618//27773535//27371828//27773536 chr17:8380273-8380274(-) m6A CDS       24284625//24209618//27773535//27371828//27773536 chr17:8381657-8381658(-) Cm CDS//exon       - chr17:8381671-8381672(-) m6A CDS//exon       24209618//24981863//27773535//27371828//22575960 chr17:8383522-8383523(-) m6A CDS//exon       24209618//24981863//27773535//27371828//27773536//22575960 chr17:8383550-8383551(-) m6A CDS//exon       24209618//24981863//27773535//27371828//27773536//22575960 chr17:8383631-8383632(-) m6A CDS//exon       24284625//24981863//27773535//27371828//27773536//22575960 chr17:8383730-8383731(-) m6A CDS//exon       24284625//24981863//27773535//27371828//27773536//22575960 chr17:8384725-8384726(-) m6A CDS//exon       27773535//27371828//27773536 chr17:8390793-8390794(-) m6A CDS       24284625//24209618//24981863//27773535//27371828 chr17:8390820-8390821(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536 chr17:8390829-8390830(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536 chr17:8390873-8390874(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960 chr17:8393660-8393661(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960 chr17:8393704-8393705(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960 chr17:8393712-8393713(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960 chr17:8393786-8393787(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960 chr17:8393812-8393813(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//27773536//22575960 chr17:8393861-8393862(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr17:8395648-8395649(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr17:8395657-8395658(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr17:8395675-8395676(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr17:8395745-8395746(-) m6A CDS       24284625//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr17:8395777-8395778(-) m6A CDS       24284625//24981863//28052920//27773535//27371828//27773536//22608085 chr17:8396148-8396149(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27773536 chr17:8396154-8396155(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27773536 chr17:8396190-8396191(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536 chr17:8396197-8396198(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536 chr17:8396207-8396208(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536 chr17:8396272-8396273(-) m1A CDS//exon       26863196 chr17:8396283-8396284(-) m1A CDS//exon       26863196 chr17:8396302-8396303(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//27773536 chr17:8397084-8397085(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536 chr17:8397129-8397130(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536 chr17:8397168-8397169(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536 chr17:8397173-8397174(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536 chr17:8397184-8397185(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536 chr17:8397208-8397209(-) m6A exon//intron       24284625//24209618//24981863//27773535//27371828 chr17:8398513-8398514(-) m1A CDS       26863196 chr17:8398524-8398525(-) m1A CDS       26863196 chr17:8402679-8402680(-) m1A CDS       26863196 chr17:8402688-8402689(-) Am CDS       - chr17:8402754-8402755(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960 chr17:8402771-8402772(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960 chr17:8404155-8404156(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960 chr17:8404194-8404195(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960 chr17:8404200-8404201(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960 chr17:8404207-8404208(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960 chr17:8404228-8404229(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr17:8404235-8404236(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr17:8404275-8404276(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:8408016-8408017(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:8408038-8408039(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:8408047-8408048(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:8408059-8408060(-) Cm CDS       - chr17:8408060-8408061(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:8408076-8408077(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:8408089-8408090(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:8408113-8408114(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:8408140-8408141(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:8408151-8408152(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:8408197-8408198(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr17:8408210-8408211(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085 chr17:8409378-8409379(-) m6A exon//intron       - chr17:8409720-8409721(-) Cm CDS//exon       - chr17:8409722-8409723(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:8409751-8409752(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr17:8409772-8409773(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr17:8409783-8409784(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr17:8411921-8411922(-) m6A CDS//exon       24981863//27773535//27371828 chr17:8411986-8411987(-) m6A CDS//exon       24981863//27773535//27371828//27773536 chr17:8413151-8413152(-) m6A CDS//exon       24981863//27773535//27371828//27773536 chr17:8413182-8413183(-) Am CDS//exon       - chr17:8413255-8413256(-) m6A CDS       24981863//27773535//27371828 chr17:8415814-8415815(-) m6A CDS       24981863//27773535//27371828 chr17:8415829-8415830(-) m1A CDS       26863196 chr17:8415891-8415892(-) m6A CDS       24209618//24981863//27773535//27371828 chr17:8415929-8415930(-) m6A CDS       24209618//24981863//27773535//27371828 chr17:8415945-8415946(-) m6A CDS       24209618//24981863//28052920//27773535//27371828 chr17:8416937-8416938(-) Am CDS       - chr17:8416948-8416949(-) m6A CDS       24981863//28052920//27773535//27371828//22575960 chr17:8422076-8422077(-) Cm CDS       - chr17:8438733-8438734(-) m6A CDS       22575960 chr17:8438778-8438779(-) m6A CDS       22575960 chr17:8438814-8438815(-) m6A CDS       24981863//22575960 chr17:8439112-8439113(-) m6A CDS       24981863//22575960 chr17:8439129-8439130(-) m6A CDS       22575960 chr17:8439168-8439169(-) m6A CDS       22575960 chr17:8439182-8439183(-) m6A CDS       22575960 chr17:8526325-8526326(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr17:8526473-8526474(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr17:8526514-8526515(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr17:8526546-8526547(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr17:8526551-8526552(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr17:8526745-8526746(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr17:8526792-8526793(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr17:8526801-8526802(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr17:8534035-8534036(-) m6A 5'UTR       25456834//24981863//27371828//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MYH10	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: MYH10

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg