Basic Information:

  VIRBase ID:  

VHID00119612

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          ITGA9:  NM_002207     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	ITGA9
miRBase Accession/Entrez ID	MIMAT0014693	3680
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ALPHA-RLC//ITGA4L//RLC

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ITGA9	chr3:37855873(+) A-I      intronic chr3:37855842(+) A-I      intronic chr3:37855837(+) A-I      intronic chr3:37828012(+) A-I      intronic chr3:37827982(+) A-I      intronic chr3:37557071(+) A-I      intronic chr3:37557067(+) A-I      intronic chr3:37557053(+) A-I      intronic chr3:37842601(+) A-I      intronic chr3:37842608(+) A-I      intronic chr3:37842659(+) A-I      intronic chr3:37557052(+) A-I      intronic chr3:37843008(+) A-I      intronic chr3:37855802(+) A-I      intronic chr3:37855824(+) A-I      intronic chr3:37557043(+) A-I      intronic chr3:37855856(+) A-I      intronic chr3:37855871(+) A-I      intronic chr3:37557027(+) A-I      intronic chr3:37514483(+) A-I      intronic chr3:37514471(+) A-I      intronic chr3:37514454(+) A-I      intronic chr3:37514453(+) A-I      intronic chr3:37514434(+) A-I      intronic chr3:37514423(+) A-I      intronic chr3:37855935(+) A-I      intronic chr3:37855936(+) A-I      intronic chr3:37855945(+) A-I      intronic chr3:37857021(+) A-I      intronic chr3:37824600(+) A-I      intronic chr3:37855861(+) A-I      intronic chr3:37842503(+) A-I      intronic chr3:37839438(+) A-I      intronic chr3:37828417(+) A-I      intronic chr3:37828377(+) A-I      intronic chr3:37828064(+) A-I      intronic chr3:37828063(+) A-I      intronic chr3:37827974(+) A-I      intronic chr3:37827965(+) A-I      intronic chr3:37827906(+) A-I      intronic chr3:37827864(+) A-I      intronic chr3:37827167(+) A-I      intronic chr3:37826992(+) A-I      intronic chr3:37824483(+) A-I      intronic chr3:37819989(+) A-I      intronic chr3:37819988(+) A-I      intronic chr3:37557147(+) A-I      intronic chr3:37514455(+) A-I      intronic chr3:37557028(+) A-I      intronic chr3:37855886(+) A-I      intronic chr3:37855892(+) A-I      intronic chr3:37855896(+) A-I      intronic chr3:37855903(+) A-I      intronic chr3:37855909(+) A-I      intronic chr3:37855881(+) A-I      intronic chr3:37664179(+) A-I      intronic chr3:37513290(+) A-I      intronic chr3:37828088(+) A-I      intronic chr3:37514372(+) A-I      intronic chr3:37828402(+) A-I      intronic chr3:37828359(+) A-I      intronic chr3:37827891(+) A-I      intronic chr3:37514087(+) A-I      intronic chr3:37828006(+) A-I      intronic chr3:37514542(+) A-I      intronic chr3:37514410(+) A-I      intronic chr3:37828361(+) A-I      intronic chr3:37827970(+) A-I      intronic chr3:37513289(+) A-I      intronic chr3:37514575(+) A-I      intronic chr3:37824886(+) A-I      intronic chr3:37826994(+) A-I      intronic chr3:37664079(+) A-I      intronic chr3:37726143(+) A-I      intronic chr3:37513384(+) A-I      intronic chr3:37827098(+) A-I      intronic chr3:37514126(+) A-I      intronic chr3:37827140(+) A-I      intronic chr3:37827892(+) A-I      intronic chr3:37827094(+) A-I      intronic chr3:37828039(+) A-I      intronic chr3:37826996(+) A-I      intronic chr3:37827104(+) A-I      intronic chr3:37827204(+) A-I      intronic chr3:37706156(+) A-I      intronic chr3:37824902(+) A-I      intronic chr3:37827929(+) A-I      intronic chr3:37827990(+) A-I      intronic chr3:37827954(+) A-I      intronic chr3:37827205(+) A-I      intronic chr3:37828357(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ITGA9	chr3:37860692-37860693(+) m6A 3'UTR       25456834//24981863 chr3:37860699-37860700(+) m6A 3'UTR       25456834//24981863 chr3:37860771-37860772(+) m6A 3'UTR       24981863 chr3:37860964-37860965(+) m6A 3'UTR       22608085 chr3:37860981-37860982(+) m6A 3'UTR       22608085 chr3:37861003-37861004(+) m6A 3'UTR       22608085 chr3:37861046-37861047(+) m6A 3'UTR       22608085 chr3:37861063-37861064(+) m6A 3'UTR       22608085 chr3:37861072-37861073(+) m6A 3'UTR       22608085 chr3:37861133-37861134(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ITGA9	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: ITGA9

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg