Basic Information:

  VIRBase ID:  

VHID00118904

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:  MIMAT0014692          FAM89A:  NM_198552     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-3p	FAM89A
miRBase Accession/Entrez ID	MIMAT0014692	375061
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C1orf153

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FAM89A	chr1:231160470(-) A-I      intronic chr1:231160317(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FAM89A	chr1:231157416(-) A-I intron -    22327324

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FAM89A	chr1:231154708-231154709(-) m6A 3'UTR       27773535 chr1:231154749-231154750(-) m6A 3'UTR       27773535 chr1:231154799-231154800(-) m6A 3'UTR       27773535//22608085 chr1:231154815-231154816(-) m6A 3'UTR       27773535//22608085 chr1:231154835-231154836(-) m6A 3'UTR       24981863//27773535//22608085 chr1:231154910-231154911(-) m6A 3'UTR       24981863//27773535//22608085 chr1:231154918-231154919(-) m6A 3'UTR       24981863//27773535//22608085 chr1:231154948-231154949(-) m6A 3'UTR//exon       24981863//22608085 chr1:231155426-231155427(-) Y 3'UTR//exon       26075521 chr1:231155562-231155563(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr1:231155666-231155667(-) m6A CDS//exon       24284625//25456834//24981863//26404942//27773535//27371828//27773536//22608085 chr1:231155684-231155685(-) m6A CDS//exon       24284625//25456834//24981863//26404942//27773535//27371828//27773536//22608085 chr1:231155705-231155706(-) m6A CDS//exon       24284625//25456834//24981863//26404942//27773535//27371828//27773536//22608085 chr1:231155768-231155769(-) m6A CDS//exon       24284625//25456834//24981863//26404942//27773535//27371828//27773536//22608085 chr1:231155852-231155853(-) m6A CDS//exon       24284625//24981863//27773536//22608085 chr1:231161757-231161758(-) m6A exon//intron       24284625//24981863//27773536//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FAM89A	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-3p
Interactor2: FAM89A

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg