Basic Information:

  VIRBase ID:  

VHID00118556

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:  MIMAT0014692          ATP8B3:  NM_001178002     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-3p	ATP8B3
miRBase Accession/Entrez ID	MIMAT0014692	148229
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ATPIK

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ATP8B3	chr19:1799680(-) A-I      NonSyn:Lys->Arg chr19:1797771(-) A-I      intronic chr19:1797936(-) A-I      intronic chr19:1797911(-) A-I      intronic chr19:1797772(-) A-I      intronic chr19:1797678(-) A-I      intronic chr19:1783972(-) A-I      intronic chr19:1797834(-) A-I      intronic chr19:1797601(-) A-I      intronic chr19:1797869(-) A-I      intronic chr19:1793192(-) A-I      intronic chr19:1793187(-) A-I      intronic chr19:1793182(-) A-I      intronic chr19:1797872(-) A-I      intronic chr19:1793201(-) A-I      intronic chr19:1798174(-) A-I      intronic chr19:1809358(-) A-I      intronic chr19:1809368(-) A-I      intronic chr19:1809371(-) A-I      intronic chr19:1809394(-) A-I      intronic chr19:1797948(-) A-I      intronic chr19:1784251(-) A-I      intronic chr19:1798047(-) A-I      intronic chr19:1798173(-) A-I      intronic chr19:1798094(-) A-I      intronic chr19:1810490(-) A-I      intronic chr19:1798108(-) A-I      intronic chr19:1798134(-) A-I      intronic chr19:1798140(-) A-I      intronic chr19:1798130(-) A-I      intronic chr19:1797637(-) A-I      intronic chr19:1797864(-) A-I      intronic chr19:1809073(-) A-I      intronic chr19:1801639(-) A-I      intronic chr19:1797636(-) A-I      intronic chr19:1810430(-) A-I      intronic chr19:1797876(-) A-I      intronic chr19:1810368(-) A-I      intronic chr19:1798039(-) A-I      intronic chr19:1809172(-) A-I      intronic chr19:1801356(-) A-I      intronic chr19:1797591(-) A-I      intronic chr19:1786482(-) A-I      intronic chr19:1787780(-) A-I      intronic chr19:1799641(-) A-I      NonSyn:Tyr->Cys

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ATP8B3	chr19:1799222(-) A-G intron -    22484847 chr19:1809073(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ATP8B3	chr19:1782270-1782271(-) m6A 3'UTR       27371828 chr19:1782308-1782309(-) m6A 3'UTR       27371828 chr19:1782482-1782483(-) m6A 3'UTR       25456834//27371828 chr19:1782503-1782504(-) m6A 3'UTR       25456834//27371828 chr19:1782508-1782509(-) m6A 3'UTR       25456834//27371828 chr19:1782613-1782614(-) m6A 3'UTR       27371828 chr19:1783072-1783073(-) m6A 3'UTR//CDS       25456834//27371828 chr19:1783110-1783111(-) m6A 3'UTR//CDS       25456834//27371828 chr19:1783144-1783145(-) m6A 3'UTR//CDS       25456834//27371828 chr19:1789553-1789554(-) m6A 3'UTR//CDS       27371828 chr19:1789670-1789671(-) m6A 3'UTR//CDS//intron       27371828 chr19:1789720-1789721(-) m6A CDS//intron       27371828 chr19:1789895-1789896(-) m6A 3'UTR//CDS//intron       27371828 chr19:1789961-1789962(-) m6A 3'UTR//CDS//intron       27371828 chr19:1791756-1791757(-) m6A 3'UTR//CDS       27371828 chr19:1799822-1799823(-) m6A CDS//exon//intron       27371828 chr19:1799830-1799831(-) m6A CDS//exon//intron       27371828 chr19:1799878-1799879(-) m6A CDS//exon//intron       27371828 chr19:1799989-1799990(-) m6A 3'UTR//CDS//exon       27371828 chr19:1800013-1800014(-) m6A 3'UTR//CDS//exon       - chr19:1806334-1806335(-) m6A 3'UTR//intron       27371828 chr19:1806363-1806364(-) m6A 3'UTR//intron       27371828 chr19:1810625-1810626(-) m6A CDS//exon       27371828 chr19:1810631-1810632(-) m6A CDS//exon       27371828 chr19:1811495-1811496(-) m6A CDS//exon//intron       27371828 chr19:1811568-1811569(-) m6A CDS//exon//intron       27371828 chr19:1811655-1811656(-) m6A 5'UTR//CDS       27371828 chr19:1811663-1811664(-) m6A 5'UTR//CDS       27371828 chr19:1811713-1811714(-) m6A CDS//intron       27371828 chr19:1811758-1811759(-) m6A 5'UTR//intron       27371828 chr19:1811775-1811776(-) m6A 5'UTR//intron       24284625//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ATP8B3	Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-3p
Interactor2: ATP8B3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg