Basic Information:

  VIRBase ID:  

VHID00118549

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:  MIMAT0014692          RUNDC1:  NM_173079     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-3p	RUNDC1
miRBase Accession/Entrez ID	MIMAT0014692	146923
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RUNDC1	chr17:41134863(+) A-I      intronic chr17:41134829(+) A-I      intronic chr17:41134815(+) A-I      intronic chr17:41135532(+) A-I      intronic chr17:41134083(+) A-I      intronic chr17:41144054(+) A-I      3'UTR chr17:41144085(+) A-I      3'UTR chr17:41135637(+) A-I      intronic chr17:41140411(+) A-I      intronic chr17:41134810(+) A-I      intronic chr17:41135633(+) A-I      intronic chr17:41135629(+) A-I      intronic chr17:41135628(+) A-I      intronic chr17:41134985(+) A-I      intronic chr17:41135554(+) A-I      intronic chr17:41134953(+) A-I      intronic chr17:41135539(+) A-I      intronic chr17:41134837(+) A-I      intronic chr17:41135542(+) A-I      intronic chr17:41135612(+) A-I      intronic chr17:41140419(+) A-I      intronic chr17:41134984(+) A-I      intronic chr17:41140431(+) A-I      intronic chr17:41135437(+) A-I      intronic chr17:41134132(+) A-I      intronic chr17:41136520(+) A-I      intronic chr17:41136378(+) A-I      intronic chr17:41134102(+) A-I      intronic chr17:41135114(+) A-I      intronic chr17:41136507(+) A-I      intronic chr17:41135961(+) A-I      intronic chr17:41136348(+) A-I      intronic chr17:41136353(+) A-I      intronic chr17:41135154(+) A-I      intronic chr17:41136391(+) A-I      intronic chr17:41136356(+) A-I      intronic chr17:41135070(+) A-I      intronic chr17:41135009(+) A-I      intronic chr17:41134936(+) A-I      intronic chr17:41134889(+) A-I      intronic chr17:41134875(+) A-I      intronic chr17:41134861(+) A-I      intronic chr17:41134807(+) A-I      intronic chr17:41134107(+) A-I      intronic chr17:41135461(+) A-I      intronic chr17:41135523(+) A-I      intronic chr17:41135580(+) A-I      intronic chr17:41135789(+) A-I      intronic chr17:41137038(+) A-I      intronic chr17:41137042(+) A-I      intronic chr17:41137113(+) A-I      intronic chr17:41137126(+) A-I      intronic chr17:41144535(+) A-I      3'UTR chr17:41144506(+) A-I      3'UTR chr17:41144425(+) A-I      3'UTR chr17:41144421(+) A-I      3'UTR chr17:41144385(+) A-I      3'UTR chr17:41144371(+) A-I      3'UTR chr17:41136481(+) A-I      intronic chr17:41135025(+) A-I      intronic chr17:41137178(+) A-I      intronic chr17:41134256(+) A-I      intronic chr17:41140933(+) A-I      intronic chr17:41135625(+) A-I      intronic chr17:41135111(+) A-I      intronic chr17:41136398(+) A-I      intronic chr17:41135098(+) A-I      intronic chr17:41134988(+) A-I      intronic chr17:41135939(+) A-I      intronic chr17:41135486(+) A-I      intronic chr17:41135187(+) A-I      intronic chr17:41135178(+) A-I      intronic chr17:41134884(+) A-I      intronic chr17:41136255(+) A-I      intronic chr17:41136267(+) A-I      intronic chr17:41136936(+) A-I      intronic chr17:41136384(+) A-I      intronic chr17:41135442(+) A-I      intronic chr17:41135156(+) A-I      intronic chr17:41134067(+) A-I      intronic chr17:41135652(+) A-I      intronic chr17:41137143(+) A-I      intronic chr17:41136194(+) A-I      intronic chr17:41140747(+) A-I      intronic chr17:41134883(+) A-I      intronic chr17:41135592(+) A-I      intronic chr17:41135082(+) A-I      intronic chr17:41144465(+) A-I      3'UTR chr17:41134736(+) A-I      intronic chr17:41136427(+) A-I      intronic chr17:41135426(+) A-I      intronic chr17:41140387(+) A-I      intronic chr17:41135097(+) A-I      intronic chr17:41135186(+) A-I      intronic chr17:41136372(+) A-I      intronic chr17:41135076(+) A-I      intronic chr17:41140370(+) A-I      intronic chr17:41136072(+) A-I      intronic chr17:41136487(+) A-I      intronic chr17:41135105(+) A-I      intronic chr17:41136057(+) A-I      intronic chr17:41135663(+) A-I      intronic chr17:41134103(+) A-I      intronic chr17:41135067(+) A-I      intronic chr17:41134771(+) A-I      intronic chr17:41135148(+) A-I      intronic chr17:41135962(+) A-I      intronic chr17:41136056(+) A-I      intronic chr17:41134974(+) A-I      intronic chr17:41134106(+) A-I      intronic chr17:41136245(+) A-I      intronic chr17:41135505(+) A-I      intronic chr17:41135963(+) A-I      intronic chr17:41134239(+) A-I      intronic chr17:41135075(+) A-I      intronic chr17:41140770(+) A-I      intronic chr17:41134735(+) A-I      intronic chr17:41135133(+) A-I      intronic chr17:41140740(+) A-I      intronic chr17:41134266(+) A-I      intronic chr17:41137104(+) A-I      intronic chr17:41134995(+) A-I      intronic chr17:41134142(+) A-I      intronic chr17:41138725(+) A-I      intronic chr17:41136367(+) A-I      intronic chr17:41134925(+) A-I      intronic chr17:41135124(+) A-I      intronic chr17:41137046(+) A-I      intronic chr17:41137039(+) A-I      intronic chr17:41135455(+) A-I      intronic chr17:41134906(+) A-I      intronic chr17:41135651(+) A-I      intronic chr17:41136541(+) A-I      intronic chr17:41134949(+) A-I      intronic chr17:41134954(+) A-I      intronic chr17:41140293(+) A-I      intronic chr17:41135522(+) A-I      intronic chr17:41143970(+) A-I      3'UTR chr17:41144424(+) A-I      3'UTR chr17:41144530(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	RUNDC1	chr17:41144530(+) A-I intron -    21960545 chr17:41134132(+) A-I intron -    21960545 chr17:41135663(+) A-I intron -    21960545 chr17:41140849(+) A-I intron -    21960545 chr17:41134735(+) A-G intron -    22484847 chr17:41134736(+) A-G intron -    22484847 chr17:41135075(+) A-G intron -    22484847 chr17:41135124(+) A-G intron -    22484847 chr17:41135148(+) A-G intron -    22484847 chr17:41135156(+) A-G intron -    22484847 chr17:41135592(+) A-G intron -    22484847 chr17:41137046(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RUNDC1	chr17:41132864-41132865(+) m6A CDS//exon       24209618//24981863 chr17:41132975-41132976(+) m6A CDS//exon       24284625 chr17:41133062-41133063(+) m6A CDS//exon       24284625//24981863 chr17:41133086-41133087(+) m6A CDS//exon       24284625//24981863 chr17:41133156-41133157(+) m6A exon//intron       - chr17:41133221-41133222(+) m6A exon//intron       - chr17:41133229-41133230(+) m6A exon//intron       - chr17:41133262-41133263(+) m6A exon//intron       - chr17:41133276-41133277(+) m6A exon//intron       - chr17:41139302-41139303(+) m6A CDS       24209618 chr17:41139325-41139326(+) m6A CDS       24209618 chr17:41139344-41139345(+) m6A CDS       24209618 chr17:41139424-41139425(+) m6A CDS       24209618 chr17:41141383-41141384(+) m6A CDS//intron       24209618 chr17:41141388-41141389(+) m6A CDS//intron       24209618 chr17:41141526-41141527(+) m6A CDS//intron       24284625 chr17:41142356-41142357(+) m6A CDS       24284625 chr17:41142367-41142368(+) m6A CDS       24284625//24209618 chr17:41142395-41142396(+) m6A CDS       24284625//24209618 chr17:41142416-41142417(+) m6A CDS       24284625//24209618 chr17:41142444-41142445(+) m6A CDS       24284625//24209618//24981863//22608085 chr17:41143020-41143021(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41143059-41143060(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41143128-41143129(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41143197-41143198(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41143213-41143214(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41143429-41143430(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41143494-41143495(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41143557-41143558(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41143713-41143714(+) m6A CDS       24284625 chr17:41143753-41143754(+) m6A 3'UTR       24284625//24981863 chr17:41143842-41143843(+) m6A 3'UTR       24284625//24981863 chr17:41143923-41143924(+) m6A 3'UTR       24284625//24981863 chr17:41144030-41144031(+) m6A 3'UTR       24209618//24981863 chr17:41144053-41144054(+) m6A 3'UTR       24209618//24981863 chr17:41144090-41144091(+) m6A 3'UTR       24981863 chr17:41144521-41144522(+) m6A 3'UTR       24284625//24981863 chr17:41144741-41144742(+) m6A 3'UTR       24284625 chr17:41144768-41144769(+) m6A 3'UTR       24284625 chr17:41144791-41144792(+) m6A 3'UTR       24284625 chr17:41144899-41144900(+) m6A 3'UTR       24284625//24981863//22608085 chr17:41144964-41144965(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr17:41144991-41144992(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr17:41145025-41145026(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41145149-41145150(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41145200-41145201(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41145250-41145251(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr17:41145341-41145342(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr17:41145375-41145376(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RUNDC1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-3p
Interactor2: RUNDC1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg