Detail Information

Basic Information:


  VIRBase ID:  

VHID00118034

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:           ELOVL7:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H14-3p ELOVL7
miRBase
Accession/Entrez ID		 MIMAT0014692 79993
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ELOVL7
chr5:60065831(-) A-I      intronic
chr5:60131495(-) A-I      intronic
chr5:60131402(-) A-I      intronic
chr5:60066601(-) A-I      intronic
chr5:60066726(-) A-I      intronic
chr5:60076135(-) A-I      intronic
chr5:60076871(-) A-I      intronic
chr5:60082530(-) A-I      intronic
chr5:60082531(-) A-I      intronic
chr5:60065769(-) A-I      intronic
chr5:60065796(-) A-I      intronic
chr5:60065754(-) A-I      intronic
chr5:60065750(-) A-I      intronic
chr5:60131415(-) A-I      intronic
chr5:60065730(-) A-I      intronic
chr5:60065729(-) A-I      intronic
chr5:60131439(-) A-I      intronic
chr5:60097408(-) A-I      intronic
chr5:60112084(-) A-I      intronic
chr5:60066772(-) A-I      intronic
chr5:60076146(-) A-I      intronic
chr5:60131331(-) A-I      intronic
chr5:60130869(-) A-I      intronic
chr5:60066635(-) A-I      intronic
chr5:60065673(-) A-I      intronic
chr5:60065734(-) A-I      intronic
chr5:60111480(-) A-I      intronic
chr5:60066600(-) A-I      intronic
chr5:60130437(-) A-I      intronic
chr5:60066608(-) A-I      intronic
chr5:60130904(-) A-I      intronic
chr5:60065694(-) A-I      intronic
chr5:60131250(-) A-I      intronic
chr5:60066627(-) A-I      intronic
chr5:60066587(-) A-I      intronic
chr5:60065666(-) A-I      intronic
chr5:60076007(-) A-I      intronic
chr5:60076915(-) A-I      intronic
chr5:60076819(-) A-I      intronic
chr5:60076179(-) A-I      intronic
chr5:60076220(-) A-I      intronic
chr5:60066754(-) A-I      intronic
chr5:60076865(-) A-I      intronic
chr5:60130383(-) A-I      intronic
chr5:60076151(-) A-I      intronic
chr5:60096893(-) A-I      intronic
chr5:60131408(-) A-I      intronic
chr5:60076219(-) A-I      intronic
chr5:60112108(-) A-I      intronic
chr5:60130432(-) A-I      intronic
chr5:60133724(-) A-I      intronic
chr5:60066689(-) A-I      intronic
chr5:60065626(-) A-I      intronic
chr5:60096817(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ELOVL7
chr5:60130458(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ELOVL7
chr5:60049806-60049807(-) m6A 3'UTR       24981863
chr5:60049834-60049835(-) m6A 3'UTR       24981863
chr5:60050354-60050355(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr5:60050424-60050425(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr5:60050463-60050464(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085
chr5:60050473-60050474(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085
chr5:60050488-60050489(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ELOVL7
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H14-3p
Interactor2: ELOVL7

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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