Basic Information:

  VIRBase ID:  

VHID00117823

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:  MIMAT0014692          ELAC2:  NM_018127     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-3p	ELAC2
miRBase Accession/Entrez ID	MIMAT0014692	60528
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	COXPD17//ELC2//HPC2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ELAC2	chr17:12897818(-) A-I      NonSyn:Lys->Glu chr17:12897816(-) A-I      Syn:Lys->Lys chr17:12897769(-) A-I      NonSyn:Glu->Gly chr17:12897817(-) A-I      NonSyn:Lys->Arg chr17:12913603(-) A-I      intronic chr17:12913715(-) A-I      intronic chr17:12913691(-) A-I      intronic chr17:12913656(-) A-I      intronic chr17:12913230(-) A-I      intronic chr17:12913487(-) A-I      intronic chr17:12913166(-) A-I      intronic chr17:12913149(-) A-I      intronic chr17:12913625(-) A-I      intronic chr17:12913523(-) A-I      intronic chr17:12913223(-) A-I      intronic chr17:12913224(-) A-I      intronic chr17:12913244(-) A-I      intronic chr17:12913237(-) A-I      intronic chr17:12913194(-) A-I      intronic chr17:12913553(-) A-I      intronic chr17:12913626(-) A-I      intronic chr17:12913767(-) A-I      intronic chr17:12913190(-) A-I      intronic chr17:12913652(-) A-I      intronic chr17:12911029(-) A-I      intronic chr17:12910950(-) A-I      intronic chr17:12911661(-) A-I      intronic chr17:12913140(-) A-I      intronic chr17:12913732(-) A-I      intronic chr17:12913041(-) A-I      intronic chr17:12913666(-) A-I      intronic chr17:12911132(-) A-I      intronic chr17:12913664(-) A-I      intronic chr17:12910249(-) A-I      intronic chr17:12913548(-) A-I      intronic chr17:12903208(-) A-I      intronic chr17:12913114(-) A-I      intronic chr17:12913184(-) A-I      intronic chr17:12913611(-) A-I      intronic chr17:12913682(-) A-I      intronic chr17:12913260(-) A-I      intronic chr17:12913585(-) A-I      intronic chr17:12913259(-) A-I      intronic chr17:12910316(-) A-I      intronic chr17:12913051(-) A-I      intronic chr17:12913604(-) A-I      intronic chr17:12913143(-) A-I      intronic chr17:12913665(-) A-I      intronic chr17:12913758(-) A-I      intronic chr17:12913658(-) A-I      intronic chr17:12911032(-) A-I      intronic chr17:12913078(-) A-I      intronic chr17:12913126(-) A-I      intronic chr17:12913062(-) A-I      intronic chr17:12913435(-) A-I      intronic chr17:12911015(-) A-I      intronic chr17:12913206(-) A-I      intronic chr17:12913663(-) A-I      intronic chr17:12913262(-) A-I      intronic chr17:12910338(-) A-I      intronic chr17:12912541(-) A-I      intronic chr17:12913681(-) A-I      intronic chr17:12913661(-) A-I      intronic chr17:12910289(-) A-I      intronic chr17:12913736(-) A-I      intronic chr17:12913667(-) A-I      intronic chr17:12913064(-) A-I      intronic chr17:12913616(-) A-I      intronic chr17:12912593(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ELAC2	chr17:12895448(-) T-A exon 3'UTR    21725310 chr17:12913140(-) A-G intron -    22484847 chr17:12913658(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ELAC2	chr17:12895753-12895754(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr17:12895793-12895794(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr17:12895848-12895849(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr17:12895889-12895890(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr17:12895946-12895947(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr17:12896115-12896116(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr17:12896122-12896123(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr17:12896348-12896349(-) m6A CDS//exon       24284625//27371828//27773536 chr17:12897088-12897089(-) m6A CDS//exon       27371828//27773536 chr17:12897748-12897749(-) m6A CDS//exon       27773535//27371828//27773536//22575960 chr17:12898112-12898113(-) m6A CDS//exon       22575960 chr17:12899924-12899925(-) m6A CDS//exon       24284625 chr17:12899933-12899934(-) m6A CDS//exon       24284625 chr17:12899978-12899979(-) m6A CDS//exon       22575960 chr17:12901786-12901787(-) m6A CDS//exon       22575960 chr17:12905791-12905792(-) m6A 3'UTR//CDS//exon       27773535 chr17:12905816-12905817(-) m6A 3'UTR//CDS//exon       27773535 chr17:12905857-12905858(-) m6A 3'UTR//CDS//exon       27773535 chr17:12905993-12905994(-) m6A exon//intron       27773535 chr17:12906002-12906003(-) m6A exon//intron       27773535 chr17:12921058-12921059(-) m6A CDS//intron       27773536//22575960 chr17:12921097-12921098(-) m6A CDS//intron       27773536//22575960 chr17:12921123-12921124(-) m6A CDS//intron       27371828//27773536//22575960 chr17:12921160-12921161(-) m6A CDS//intron       27371828//27773536//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ELAC2	Chromatin K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-3p
Interactor2: ELAC2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg