Basic Information:

  VIRBase ID:  

VHID00117698

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:  MIMAT0014692          NIPAL3:  NM_001322857     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-3p	NIPAL3
miRBase Accession/Entrez ID	MIMAT0014692	57185
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DJ462O23.2//NPAL3//SLC57A5

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NIPAL3	chr1:24762010(+) A-I      intronic chr1:24761998(+) A-I      intronic chr1:24762039(+) A-I      intronic chr1:24760372(+) A-I      intronic chr1:24762045(+) A-I      intronic chr1:24762003(+) A-I      intronic chr1:24762023(+) A-I      intronic chr1:24762058(+) A-I      intronic chr1:24762048(+) A-I      intronic chr1:24761970(+) A-I      intronic chr1:24760367(+) A-I      intronic chr1:24761992(+) A-I      intronic chr1:24762008(+) A-I      intronic chr1:24758676(+) A-I      intronic chr1:24756923(+) A-I      intronic chr1:24756873(+) A-I      intronic chr1:24754682(+) A-I      intronic chr1:24754619(+) A-I      intronic chr1:24761996(+) A-I      intronic chr1:24760373(+) A-I      intronic chr1:24783026(+) A-I      intronic chr1:24763687(+) A-I      intronic chr1:24778129(+) A-I      intronic chr1:24779294(+) A-I      intronic chr1:24746810(+) A-I      intronic chr1:24763079(+) A-I      intronic chr1:24763172(+) A-I      intronic chr1:24777924(+) A-I      intronic chr1:24763211(+) A-I      intronic chr1:24763533(+) A-I      intronic chr1:24746878(+) A-I      intronic chr1:24779318(+) A-I      intronic chr1:24779389(+) A-I      intronic chr1:24779401(+) A-I      intronic chr1:24779460(+) A-I      intronic chr1:24783002(+) A-I      intronic chr1:24747648(+) A-I      intronic chr1:24783132(+) A-I      intronic chr1:24783410(+) A-I      intronic chr1:24747658(+) A-I      intronic chr1:24747676(+) A-I      intronic chr1:24747783(+) A-I      intronic chr1:24752871(+) A-I      intronic chr1:24752902(+) A-I      intronic chr1:24754507(+) A-I      intronic chr1:24754554(+) A-I      intronic chr1:24754615(+) A-I      intronic chr1:24763621(+) A-I      intronic chr1:24754623(+) A-I      intronic chr1:24763032(+) A-I      intronic chr1:24783475(+) A-I      intronic chr1:24746451(+) A-I      ncRNA chr1:24763263(+) A-I      intronic chr1:24752965(+) A-I      intronic chr1:24747606(+) A-I      intronic chr1:24747850(+) A-I      intronic chr1:24783473(+) A-I      intronic chr1:24783462(+) A-I      intronic chr1:24754486(+) A-I      intronic chr1:24798010(+) A-I      3'UTR chr1:24783106(+) A-I      intronic chr1:24752914(+) A-I      intronic chr1:24746714(+) A-I      intronic chr1:24754481(+) A-I      intronic chr1:24763035(+) A-I      intronic chr1:24755755(+) A-I      intronic chr1:24763218(+) A-I      intronic chr1:24758757(+) A-I      intronic chr1:24758800(+) A-I      intronic chr1:24758806(+) A-I      intronic chr1:24778086(+) A-I      intronic chr1:24758869(+) A-I      intronic chr1:24783481(+) A-I      intronic chr1:24752974(+) A-I      intronic chr1:24760366(+) A-I      intronic chr1:24754472(+) A-I      intronic chr1:24758879(+) A-I      intronic chr1:24752924(+) A-I      intronic chr1:24754609(+) A-I      intronic chr1:24783065(+) A-I      intronic chr1:24760448(+) A-I      intronic chr1:24749997(+) A-I      intronic chr1:24758797(+) A-I      intronic chr1:24783482(+) A-I      intronic chr1:24756949(+) A-I      intronic chr1:24760384(+) A-I      intronic chr1:24783031(+) A-I      intronic chr1:24762071(+) A-I      intronic chr1:24752885(+) A-I      intronic chr1:24761904(+) A-I      intronic chr1:24752959(+) A-I      intronic chr1:24761916(+) A-I      intronic chr1:24789493(+) A-I      intronic chr1:24758817(+) A-I      intronic chr1:24761950(+) A-I      intronic chr1:24783063(+) A-I      intronic chr1:24778072(+) A-I      intronic chr1:24758784(+) A-I      intronic chr1:24756865(+) A-I      intronic chr1:24747667(+) A-I      intronic chr1:24783055(+) A-I      intronic chr1:24758878(+) A-I      intronic chr1:24747791(+) A-I      intronic chr1:24763486(+) A-I      intronic chr1:24782100(+) A-I      intronic chr1:24778094(+) A-I      intronic chr1:24746871(+) A-I      intronic chr1:24752926(+) A-I      intronic chr1:24779303(+) A-I      intronic chr1:24754552(+) A-I      intronic chr1:24783513(+) A-I      intronic chr1:24778170(+) A-I      intronic chr1:24783333(+) A-I      intronic chr1:24777971(+) A-I      intronic chr1:24762018(+) A-I      intronic chr1:24754685(+) A-I      intronic chr1:24763043(+) A-I      intronic chr1:24754489(+) A-I      intronic chr1:24754671(+) A-I      intronic chr1:24746885(+) A-I      intronic chr1:24760453(+) A-I      intronic chr1:24758681(+) A-I      intronic chr1:24762073(+) A-I      intronic chr1:24761962(+) A-I      intronic chr1:24761948(+) A-I      intronic chr1:24784675(+) A-I      intronic chr1:24760355(+) A-I      intronic chr1:24783488(+) A-I      intronic chr1:24783517(+) A-I      intronic chr1:24763487(+) A-I      intronic chr1:24762028(+) A-I      intronic chr1:24752884(+) A-I      intronic chr1:24782963(+) A-I      intronic chr1:24754480(+) A-I      intronic chr1:24763108(+) A-I      intronic chr1:24760447(+) A-I      intronic chr1:24752968(+) A-I      intronic chr1:24761995(+) A-I      intronic chr1:24747774(+) A-I      intronic chr1:24750041(+) A-I      intronic chr1:24752836(+) A-I      intronic chr1:24760444(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NIPAL3	chr1:24762008(+) A-I intron -    22028664 chr1:24762011(+) A-I intron -    22028664 chr1:24762018(+) A-I intron -    22028664 chr1:24762023(+) A-I intron -    22028664 chr1:24762028(+) A-I intron -    22028664 chr1:24762031(+) A-I intron -    22028664 chr1:24762035(+) A-I intron -    22028664 chr1:24760355(+) A-G intron -    22484847 chr1:24760444(+) A-G intron -    22484847 chr1:24760447(+) A-G intron -    22484847 chr1:24760448(+) A-G intron -    22484847 chr1:24760453(+) A-G intron -    22484847 chr1:24761904(+) A-G intron -    22484847 chr1:24761916(+) A-G intron -    22484847 chr1:24761948(+) A-G intron -    22484847 chr1:24761950(+) A-G intron -    22484847 chr1:24762018(+) A-G intron -    22484847 chr1:24762028(+) A-G intron -    22484847 chr1:24746714(+) A-G intron -    22484847 chr1:24747667(+) A-G intron -    22484847 chr1:24747774(+) A-G intron -    22484847 chr1:24749997(+) A-G intron -    22484847 chr1:24752836(+) A-G intron -    22484847 chr1:24752885(+) A-G intron -    22484847 chr1:24752926(+) A-G intron -    22484847 chr1:24752959(+) A-G intron -    22484847 chr1:24754609(+) A-G intron -    22484847 chr1:24758681(+) A-G intron -    22484847 chr1:24758800(+) A-G intron -    22484847 chr1:24783031(+) A-G intron -    22484847 chr1:24783055(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NIPAL3	chr1:24745792-24745793(+) m6A 5'UTR//exon       24284625//24981863 chr1:24745800-24745801(+) m6A 5'UTR//exon       24284625//24981863 chr1:24745943-24745944(+) m6A 5'UTR//exon       24284625 chr1:24746031-24746032(+) m6A 5'UTR//exon       24284625//24209618//25456834//24981863 chr1:24748381-24748382(+) m6A exon//intron       - chr1:24748392-24748393(+) m6A exon//intron       - chr1:24748404-24748405(+) m6A exon//intron       - chr1:24748493-24748494(+) m6A exon//intron       - chr1:24748570-24748571(+) m6A exon//intron       22608085 chr1:24748588-24748589(+) m6A exon//intron       22608085 chr1:24792643-24792644(+) m6A 3'UTR//intron       25456834 chr1:24792687-24792688(+) m6A 3'UTR//intron       25456834 chr1:24792693-24792694(+) m6A 3'UTR//intron       25456834 chr1:24792706-24792707(+) m6A 3'UTR//intron       25456834 chr1:24792719-24792720(+) m6A 3'UTR//intron       25456834 chr1:24792751-24792752(+) m6A 3'UTR//intron       25456834 chr1:24792821-24792822(+) m6A 3'UTR//intron       - chr1:24792827-24792828(+) m6A 3'UTR//intron       - chr1:24792832-24792833(+) m6A 3'UTR//intron       - chr1:24792854-24792855(+) m6A 3'UTR//intron       24284625 chr1:24792860-24792861(+) m6A 3'UTR//intron       24284625 chr1:24795484-24795485(+) m6A CDS       24284625//24981863 chr1:24795518-24795519(+) m6A CDS       24284625//24981863 chr1:24795553-24795554(+) m6A CDS       24284625//24981863//22608085 chr1:24795676-24795677(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr1:24795741-24795742(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr1:24795778-24795779(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr1:24797422-24797423(+) m6A 3'UTR       - chr1:24797441-24797442(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NIPAL3	Chromatin K562 cells     - Cytosol K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-3p
Interactor2: NIPAL3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg