Basic Information:

  VIRBase ID:  

VHID00117265

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:  MIMAT0014692          CYP2S1:  NM_030622     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-3p	CYP2S1
miRBase Accession/Entrez ID	MIMAT0014692	29785
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CYPIIS1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CYP2S1	chr19:41706969(+) A-I      intronic chr19:41710712(+) A-I      intronic chr19:41706787(+) A-I      intronic chr19:41706788(+) A-I      intronic chr19:41706783(+) A-I      intronic chr19:41706784(+) A-I      intronic chr19:41705307(+) A-I      intronic chr19:41707950(+) A-I      intronic chr19:41705728(+) A-I      intronic chr19:41703484(+) A-I      intronic chr19:41708545(+) A-I      intronic chr19:41705309(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CYP2S1	chr19:41699244-41699245(+) m6A CDS       24981863 chr19:41700465-41700466(+) m6A 5'UTR//CDS//intron       24284625 chr19:41700489-41700490(+) m6A 5'UTR//CDS//intron       24284625 chr19:41700577-41700578(+) m6A 5'UTR//CDS//intron       24284625//24209618 chr19:41700598-41700599(+) m6A CDS//intron       24284625 chr19:41712384-41712385(+) m6A 3'UTR//CDS       25456834//24981863//26404942 chr19:41712457-41712458(+) m6A 3'UTR       24284625//25456834//24981863 chr19:41712638-41712639(+) m6A 3'UTR       24284625//24981863 chr19:41712796-41712797(+) m6A 3'UTR       24284625//24981863 chr19:41712835-41712836(+) m6A 3'UTR       24284625//24981863 chr19:41712870-41712871(+) m6A 3'UTR       24284625//24981863//26404942 chr19:41713026-41713027(+) m6A 3'UTR       24284625//24209618//24981863 chr19:41713121-41713122(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr19:41713151-41713152(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr19:41713158-41713159(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr19:41713168-41713169(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr19:41713173-41713174(+) Cm 3'UTR       - chr19:41713176-41713177(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr19:41713185-41713186(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr19:41713308-41713309(+) m6A 3'UTR       24284625//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CYP2S1	Exosome Blood     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-3p
Interactor2: CYP2S1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg