Basic Information:

  VIRBase ID:  

VHID00117225

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:  MIMAT0014692          BRPF3:  NM_015695     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-3p	BRPF3
miRBase Accession/Entrez ID	MIMAT0014692	27154
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BRPF3	chr6:36182919(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BRPF3	chr6:36165174-36165175(+) m6A 5'UTR//intron       24209618 chr6:36168189-36168190(+) m6A CDS       24284625//22608085 chr6:36168229-36168230(+) m6A CDS       24284625//22608085 chr6:36168337-36168338(+) m6A CDS       24284625//22608085 chr6:36168344-36168345(+) m6A CDS       24284625//22608085 chr6:36168374-36168375(+) m6A CDS       24284625//22608085 chr6:36168466-36168467(+) m6A CDS       24284625//25456834//24981863//22608085 chr6:36168538-36168539(+) m6A CDS       24284625//25456834//24981863//22608085 chr6:36168577-36168578(+) m6A CDS       24284625//25456834//24981863//22608085 chr6:36168592-36168593(+) m6A CDS       24284625//25456834//24981863//22608085 chr6:36168664-36168665(+) m6A CDS       24981863//22608085 chr6:36168938-36168939(+) m6A CDS       24284625//24981863//22575960//22608085 chr6:36168942-36168943(+) m6A CDS       - chr6:36169022-36169023(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr6:36169064-36169065(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr6:36169126-36169127(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:36169200-36169201(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:36169236-36169237(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:36169317-36169318(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:36169363-36169364(+) m1A CDS       26863196 chr6:36169384-36169385(+) m1A CDS       26863196 chr6:36169495-36169496(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr6:36172208-36172209(+) m6A 5'UTR//intron       24981863 chr6:36177605-36177606(+) Y CDS       26075521 chr6:36178095-36178096(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr6:36178140-36178141(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr6:36178176-36178177(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr6:36178221-36178222(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr6:36178278-36178279(+) m6A 3'UTR//CDS       24284625//24209618//25456834//22608085 chr6:36179037-36179038(+) m6A 3'UTR//CDS//exon//intron       24284625 chr6:36179058-36179059(+) m6A 3'UTR//CDS//exon//intron       24284625 chr6:36179107-36179108(+) m6A 3'UTR//CDS//exon//intron       24284625 chr6:36179112-36179113(+) m6A 3'UTR//CDS//exon//intron       24284625 chr6:36179240-36179241(+) m6A 3'UTR//CDS//exon//intron       24284625 chr6:36179331-36179332(+) m6A 3'UTR//CDS//exon//intron       24284625 chr6:36181666-36181667(+) m6A 3'UTR//CDS//exon//intron       24284625 chr6:36181753-36181754(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863 chr6:36181771-36181772(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863 chr6:36181891-36181892(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:36182007-36182008(+) m6A 3'UTR//CDS//intron       24284625//25456834 chr6:36182031-36182032(+) m6A 3'UTR//CDS//intron       24284625//25456834 chr6:36182147-36182148(+) Cm 3'UTR//CDS//intron       - chr6:36182159-36182160(+) m6A 3'UTR//CDS//intron       - chr6:36185715-36185716(+) m6A 3'UTR//CDS//intron       - chr6:36198952-36198953(+) m6A 3'UTR       24981863 chr6:36198962-36198963(+) m6A 3'UTR       24981863 chr6:36199057-36199058(+) m6A 3'UTR       - chr6:36199096-36199097(+) m6A 3'UTR       - chr6:36199116-36199117(+) m6A 3'UTR       - chr6:36199430-36199431(+) m6A 3'UTR       24284625 chr6:36199520-36199521(+) m6A 3'UTR       24981863 chr6:36199595-36199596(+) m6A 3'UTR       24981863 chr6:36199623-36199624(+) m6A 3'UTR       - chr6:36199663-36199664(+) m6A 3'UTR       - chr6:36199881-36199882(+) m6A 3'UTR       24981863//27773535 chr6:36199905-36199906(+) m6A 3'UTR       24981863//27773535 chr6:36199914-36199915(+) m6A 3'UTR       24981863//27773535 chr6:36199963-36199964(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BRPF3	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-3p
Interactor2: BRPF3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg