Basic Information:

  VIRBase ID:  

VHID00117133

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:  MIMAT0014692          APOL2:  NM_145637     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-3p	APOL2
miRBase Accession/Entrez ID	MIMAT0014692	23780
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	APOL-II//APOL3

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	APOL2	chr22:36633532(-) C-A intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	APOL2	chr22:36622270-36622271(-) m6A 3'UTR       27773535 chr22:36622735-36622736(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr22:36622757-36622758(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr22:36622769-36622770(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr22:36622816-36622817(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr22:36622861-36622862(-) m6A 3'UTR       24284625//24981863//28052920//27773535//22608085 chr22:36622877-36622878(-) m1A 3'UTR       26863196 chr22:36622902-36622903(-) m6A 3'UTR       24284625//24981863//28052920//27773535//22608085 chr22:36622934-36622935(-) m6A 3'UTR       24284625//24981863//28052920//27773535//22608085 chr22:36623025-36623026(-) m6A 3'UTR       24284625//24209618//24981863//27773535 chr22:36623069-36623070(-) m6A 3'UTR       24284625//24209618//27773535 chr22:36623242-36623243(-) m6A 3'UTR       24209618 chr22:36623297-36623298(-) m6A 3'UTR       24209618 chr22:36623388-36623389(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//27773536 chr22:36623399-36623400(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//27773536 chr22:36623456-36623457(-) m6A CDS       24284625//24209618//27773535//27371828//27773536 chr22:36623649-36623650(-) m6A CDS       24284625//24209618//27773535 chr22:36623698-36623699(-) m6A CDS       24284625//24209618//27773535 chr22:36623795-36623796(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr22:36623858-36623859(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr22:36623909-36623910(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr22:36623945-36623946(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr22:36623953-36623954(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr22:36624014-36624015(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr22:36624242-36624243(-) m6A CDS       24981863//28052920 chr22:36624257-36624258(-) m6A CDS       24981863//28052920 chr22:36624263-36624264(-) m6A CDS       24981863//28052920 chr22:36624293-36624294(-) m6A CDS       28052920 chr22:36627393-36627394(-) m6A CDS       28052920 chr22:36629261-36629262(-) m6A 5'UTR//CDS       24981863 chr22:36629275-36629276(-) m6A 5'UTR//CDS       24981863 chr22:36629491-36629492(-) m6A 5'UTR//CDS       24209618//24981863//27773535 chr22:36630343-36630344(-) m6A 5'UTR//intron       24981863//27773535 chr22:36630356-36630357(-) m6A 5'UTR//intron       24981863//27773535 chr22:36630375-36630376(-) m6A 5'UTR//intron       24981863 chr22:36632958-36632959(-) m6A exon//intron       - chr22:36632985-36632986(-) m6A exon//intron       - chr22:36633018-36633019(-) m6A exon//intron       24284625 chr22:36633181-36633182(-) m6A CDS//exon//intron       25456834//27371828 chr22:36633285-36633286(-) m6A exon//intron       25456834//24981863//27371828 chr22:36635207-36635208(-) m6A 5'UTR//exon//intron       24981863 chr22:36635265-36635266(-) m6A 5'UTR//exon//intron       24981863 chr22:36635528-36635529(-) m6A 5'UTR//CDS//exon       24981863//26404942 chr22:36635698-36635699(-) m6A exon//intron       24981863 chr22:36635803-36635804(-) m6A 5'UTR       24981863 chr22:36635825-36635826(-) m6A 5'UTR       24981863 chr22:36635861-36635862(-) m6A 5'UTR       24981863 chr22:36635916-36635917(-) m6A 5'UTR       24981863 chr22:36635986-36635987(-) m6A 5'UTR       24981863 chr22:36635994-36635995(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	APOL2	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-3p
Interactor2: APOL2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg