Basic Information:

  VIRBase ID:  

VHID00116496

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:  MIMAT0014692          ALDH4A1:  NM_003748     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-3p	ALDH4A1
miRBase Accession/Entrez ID	MIMAT0014692	8659
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ALDH4//P5CD//P5CDh

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ALDH4A1	chr1:19206120(-) A-I      intronic chr1:19220778(-) A-I      intronic chr1:19203188(-) A-I      intronic chr1:19204516(-) A-I      intronic chr1:19204288(-) A-I      intronic chr1:19220134(-) A-I      intronic chr1:19214266(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ALDH4A1	chr1:19204276(-) C-T intron -    22484847 chr1:19204288(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ALDH4A1	chr1:19198171-19198172(-) m6A 3'UTR       24209618//25456834//27773535 chr1:19198213-19198214(-) m6A 3'UTR       24209618//25456834//27773535 chr1:19198968-19198969(-) m6A 3'UTR//intron       - chr1:19199363-19199364(-) m6A CDS       27773535 chr1:19199382-19199383(-) m6A CDS       27773535 chr1:19209088-19209089(-) m6A exon//intron       27773535 chr1:19209115-19209116(-) m6A exon//intron       27773535 chr1:19209121-19209122(-) m6A exon//intron       27773535 chr1:19209915-19209916(-) m6A CDS//exon       27371828 chr1:19211969-19211970(-) m6A CDS//exon       27371828 chr1:19211980-19211981(-) m6A CDS//exon       27371828 chr1:19212021-19212022(-) m6A CDS//exon       27371828 chr1:19212051-19212052(-) m6A CDS//exon       27371828 chr1:19215937-19215938(-) m6A 5'UTR//CDS       27773536 chr1:19217194-19217195(-) m6A 5'UTR//intron       27773536 chr1:19217201-19217202(-) m6A 5'UTR//intron       27773536 chr1:19228965-19228966(-) m6A CDS       24981863 chr1:19229038-19229039(-) m6A 5'UTR       24981863 chr1:19229133-19229134(-) m6A 5'UTR       24981863 chr1:19229159-19229160(-) m6A 5'UTR       24981863 chr1:19229252-19229253(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ALDH4A1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-3p
Interactor2: ALDH4A1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg