Detail Information

Basic Information:


  VIRBase ID:  

VHID00116469

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:           CUL2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H14-3p CUL2
miRBase
Accession/Entrez ID		 MIMAT0014692 8453
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CUL2
chr10:35362701(-) A-I      intronic
chr10:35362700(-) A-I      intronic
chr10:35369603(-) A-I      intronic
chr10:35362708(-) A-I      intronic
chr10:35332453(-) A-I      intronic
chr10:35301087(-) A-I      intronic
chr10:35362697(-) A-I      intronic
chr10:35301079(-) A-I      intronic
chr10:35319561(-) A-I      intronic
chr10:35367466(-) A-I      intronic
chr10:35369545(-) A-I      intronic
chr10:35350809(-) A-I      intronic
chr10:35362704(-) A-I      intronic
chr10:35350792(-) A-I      intronic
chr10:35301078(-) A-I      intronic
chr10:35350800(-) A-I      intronic
chr10:35326688(-) A-I      intronic
chr10:35369885(-) A-I      intronic
chr10:35375482(-) A-I      intronic
chr10:35375479(-) A-I      intronic
chr10:35325881(-) A-I      intronic
chr10:35371138(-) A-I      intronic
chr10:35300169(-) A-I      intronic
chr10:35370979(-) A-I      intronic
chr10:35370965(-) A-I      intronic
chr10:35305675(-) A-I      intronic
chr10:35370964(-) A-I      intronic
chr10:35357935(-) A-I      intronic
chr10:35325884(-) A-I      intronic
chr10:35370738(-) A-I      intronic
chr10:35313058(-) A-I      intronic
chr10:35370683(-) A-I      intronic
chr10:35376115(-) A-I      intronic
chr10:35370662(-) A-I      intronic
chr10:35369907(-) A-I      intronic
chr10:35369656(-) A-I      intronic
chr10:35306558(-) A-I      intronic
chr10:35369633(-) A-I      intronic
chr10:35375376(-) A-I      intronic
chr10:35370699(-) A-I      intronic
chr10:35302151(-) A-I      intronic
chr10:35367352(-) A-I      intronic
chr10:35369611(-) A-I      intronic
chr10:35365858(-) A-I      intronic
chr10:35355266(-) A-I      intronic
chr10:35365733(-) A-I      intronic
chr10:35357863(-) A-I      intronic
chr10:35356461(-) A-I      intronic
chr10:35356066(-) A-I      intronic
chr10:35356029(-) A-I      intronic
chr10:35355500(-) A-I      intronic
chr10:35354710(-) A-I      intronic
chr10:35319567(-) A-I      intronic
chr10:35354704(-) A-I      intronic
chr10:35354687(-) A-I      intronic
chr10:35354425(-) A-I      intronic
chr10:35319721(-) A-I      intronic
chr10:35357864(-) A-I      intronic
chr10:35319738(-) A-I      intronic
chr10:35354359(-) A-I      intronic
chr10:35353717(-) A-I      intronic
chr10:35350808(-) A-I      intronic
chr10:35366194(-) A-I      intronic
chr10:35330702(-) A-I      intronic
chr10:35375040(-) A-I      intronic
chr10:35325822(-) A-I      intronic
chr10:35325864(-) A-I      intronic
chr10:35306456(-) A-I      intronic
chr10:35373067(-) A-I      intronic
chr10:35375341(-) A-I      intronic
chr10:35300446(-) A-I      intronic
chr10:35358222(-) A-I      intronic
chr10:35375380(-) A-I      intronic
chr10:35375180(-) A-I      intronic
chr10:35304102(-) A-I      intronic
chr10:35300483(-) A-I      intronic
chr10:35300470(-) A-I      intronic
chr10:35353679(-) A-I      intronic
chr10:35353750(-) A-I      intronic
chr10:35325851(-) A-I      intronic
chr10:35357934(-) A-I      intronic
chr10:35305688(-) A-I      intronic
chr10:35300540(-) A-I      intronic
chr10:35369583(-) A-I      intronic
chr10:35325895(-) A-I      intronic
chr10:35330478(-) A-I      intronic
chr10:35353721(-) A-I      intronic
chr10:35375599(-) A-I      intronic
chr10:35300103(-) A-I      intronic
chr10:35362661(-) A-I      intronic
chr10:35356028(-) A-I      intronic
chr10:35375190(-) A-I      intronic
chr10:35376101(-) A-I      intronic
chr10:35358455(-) A-I      intronic
chr10:35301082(-) A-I      intronic
chr10:35377975(-) A-I      intronic
chr10:35357895(-) A-I      intronic
chr10:35376189(-) A-I      intronic
chr10:35369655(-) A-I      intronic
chr10:35374122(-) A-I      intronic
chr10:35307103(-) A-I      intronic
chr10:35311829(-) A-I      intronic
chr10:35327039(-) A-I      intronic
chr10:35330573(-) A-I      intronic
chr10:35319562(-) A-I      intronic
chr10:35377981(-) A-I      intronic
chr10:35325826(-) A-I      intronic
chr10:35369524(-) A-I      intronic
chr10:35356482(-) A-I      intronic
chr10:35375174(-) A-I      intronic
chr10:35369664(-) A-I      intronic
chr10:35357925(-) A-I      intronic
chr10:35362725(-) A-I      intronic
chr10:35366501(-) A-I      intronic
chr10:35366580(-) A-I      intronic
chr10:35356513(-) A-I      intronic
chr10:35330729(-) A-I      intronic
chr10:35358070(-) A-I      intronic
chr10:35358387(-) A-I      intronic
chr10:35369602(-) A-I      intronic
chr10:35309925(-) A-I      intronic
chr10:35371151(-) A-I      intronic
chr10:35376144(-) A-I      intronic
chr10:35365761(-) A-I      intronic
chr10:35362785(-) A-I      intronic
chr10:35300097(-) A-I      intronic
chr10:35375318(-) A-I      intronic
chr10:35365868(-) A-I      intronic
chr10:35375207(-) A-I      intronic
chr10:35301119(-) A-I      intronic
chr10:35355499(-) A-I      intronic
chr10:35358067(-) A-I      intronic
chr10:35330737(-) A-I      intronic
chr10:35362605(-) A-I      intronic
chr10:35367515(-) A-I      intronic
chr10:35355268(-) A-I      intronic
chr10:35301074(-) A-I      intronic
chr10:35367388(-) A-I      intronic
chr10:35369950(-) A-I      intronic
chr10:35301120(-) A-I      intronic
chr10:35375602(-) A-I      intronic
chr10:35375326(-) A-I      intronic
chr10:35319739(-) A-I      intronic
chr10:35300422(-) A-I      intronic
chr10:35355350(-) A-I      intronic
chr10:35363517(-) A-I      intronic
chr10:35375168(-) A-I      intronic
chr10:35357298(-) A-I      intronic
chr10:35369931(-) A-I      intronic
chr10:35356026(-) A-I      intronic
chr10:35371007(-) A-I      intronic
chr10:35353743(-) A-I      intronic
chr10:35300411(-) A-I      intronic
chr10:35353697(-) A-I      intronic
chr10:35376118(-) A-I      intronic
chr10:35369939(-) A-I      intronic
chr10:35375181(-) A-I      intronic
chr10:35367361(-) A-I      intronic
chr10:35358463(-) A-I      intronic
chr10:35300538(-) A-I      intronic
chr10:35374996(-) A-I      intronic
chr10:35347697(-) A-I      intronic
chr10:35300087(-) A-I      intronic
chr10:35297903(-) A-I      3'UTR
chr10:35370655(-) A-I      intronic
chr10:35366525(-) A-I      intronic
chr10:35344629(-) A-I      intronic
chr10:35358393(-) A-I      intronic
chr10:35300018(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CUL2
chr10:35297958(-) T-C exon 3'UTR    22484847
chr10:35353697(-) A-G intron -    22484847
chr10:35355350(-) A-G intron -    22484847
chr10:35375376(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CUL2
chr10:35297524-35297525(-) m6A 3'UTR       27773535
chr10:35297560-35297561(-) m6A 3'UTR       27773535
chr10:35297626-35297627(-) m6A 3'UTR       27773535
chr10:35298830-35298831(-) m6A 3'UTR       27773535//22608085
chr10:35298888-35298889(-) m6A 3'UTR       27773535//22608085
chr10:35298903-35298904(-) m6A 3'UTR       27773535//22608085
chr10:35299028-35299029(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr10:35299162-35299163(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr10:35299296-35299297(-) m6A 3'UTR//CDS       27773535
chr10:35300857-35300858(-) m6A 3'UTR//CDS//intron       24981863//27773535
chr10:35300879-35300880(-) m6A 3'UTR//CDS//intron       24981863//27773535
chr10:35302636-35302637(-) m6A 3'UTR//CDS       24981863//27773535
chr10:35302670-35302671(-) m6A 3'UTR//CDS       24981863//27773535
chr10:35302687-35302688(-) m6A 3'UTR//CDS       24981863//27773535
chr10:35343382-35343383(-) m6A 3'UTR//CDS       24981863
chr10:35343419-35343420(-) m6A 3'UTR//CDS       24981863
chr10:35379521-35379522(-) m6A 5'UTR       25456834//24981863
chr10:35379527-35379528(-) m1A 5'UTR       26863196

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CUL2
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H14-3p
Interactor2: CUL2

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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