Detail Information

Basic Information:


  VIRBase ID:  

VHID00115444

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:           ADAR:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H14-3p ADAR
miRBase
Accession/Entrez ID		 MIMAT0014692 103
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - ADAR1//AGS6//DRADA//DSH//DSRAD//G1P1//IFI-4//IFI4//K88DSRBP//P136

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ADAR
chr1:154565377(-) A-I      intronic
chr1:154585889(-) A-I      intronic
chr1:154586214(-) A-I      intronic
chr1:154585893(-) A-I      intronic
chr1:154586304(-) A-I      intronic
chr1:154598264(-) A-I      intronic
chr1:154598663(-) A-I      intronic
chr1:154585032(-) A-I      intronic
chr1:154584936(-) A-I      intronic
chr1:154598659(-) A-I      intronic
chr1:154585420(-) A-I      intronic
chr1:154585426(-) A-I      intronic
chr1:154598785(-) A-I      intronic
chr1:154584975(-) A-I      intronic
chr1:154586215(-) A-I      intronic
chr1:154586298(-) A-I      intronic
chr1:154585436(-) A-I      intronic
chr1:154584974(-) A-I      intronic
chr1:154584973(-) A-I      intronic
chr1:154585004(-) A-I      intronic
chr1:154585850(-) A-I      intronic
chr1:154598786(-) A-I      intronic
chr1:154565449(-) A-I      intronic
chr1:154586280(-) A-I      intronic
chr1:154598398(-) A-I      intronic
chr1:154565463(-) A-I      intronic
chr1:154565446(-) A-I      intronic
chr1:154586297(-) A-I      intronic
chr1:154584942(-) A-I      intronic
chr1:154578706(-) A-I      5'UTR
chr1:154598541(-) A-I      intronic
chr1:154598538(-) A-I      intronic
chr1:154586049(-) A-I      intronic
chr1:154585921(-) A-I      intronic
chr1:154588006(-) A-I      intronic
chr1:154586193(-) A-I      intronic
chr1:154584978(-) A-I      intronic
chr1:154566590(-) A-I      intronic
chr1:154598428(-) A-I      intronic
chr1:154586050(-) A-I      intronic
chr1:154598105(-) A-I      intronic
chr1:154585943(-) A-I      intronic
chr1:154598880(-) A-I      intronic
chr1:154598466(-) A-I      intronic
chr1:154598078(-) A-I      intronic
chr1:154598309(-) A-I      intronic
chr1:154563373(-) A-I      intronic
chr1:154586007(-) A-I      intronic
chr1:154563368(-) A-I      intronic
chr1:154598317(-) A-I      intronic
chr1:154585857(-) A-I      intronic
chr1:154585043(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ADAR
chr1:154563368(-) A-G intron -    22484847
chr1:154578706(-) A-G intron -    22484847
chr1:154584942(-) A-G intron -    22484847
chr1:154585857(-) A-G intron -    22484847
chr1:154586007(-) A-G intron -    22484847
chr1:154586193(-) A-G intron -    22484847
chr1:154586280(-) A-G intron -    22484847
chr1:154586297(-) A-G intron -    22484847
chr1:154588006(-) A-G intron -    22484847
chr1:154598078(-) A-G intron -    22484847
chr1:154598309(-) A-G intron -    22484847
chr1:154598428(-) A-G intron -    22484847
chr1:154598466(-) A-G intron -    22484847
chr1:154598538(-) A-G intron -    22484847
chr1:154598541(-) A-G intron -    22484847
chr1:154598880(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ADAR
chr1:154554554-154554555(-) m6A 3'UTR       28052920//22608085
chr1:154554661-154554662(-) m6A 3'UTR       24284625//25456834//24981863//28052920//22575960//22608085
chr1:154554675-154554676(-) m6A 3'UTR       24284625//25456834//24981863//28052920//22575960//22608085
chr1:154554729-154554730(-) m6A 3'UTR       24284625//25456834//22575960
chr1:154554813-154554814(-) m6A 3'UTR       24284625
chr1:154554935-154554936(-) m6A 3'UTR       27773535
chr1:154555094-154555095(-) m6A 3'UTR       27773535
chr1:154555117-154555118(-) m6A 3'UTR       27773535
chr1:154555775-154555776(-) Cm 3'UTR       -
chr1:154556050-154556051(-) m6A 3'UTR       26404942
chr1:154557049-154557050(-) m6A 3'UTR       24284625//26404942
chr1:154557140-154557141(-) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535
chr1:154557303-154557304(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154557320-154557321(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154557333-154557334(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154557372-154557373(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154557425-154557426(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154557483-154557484(-) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr1:154562661-154562662(-) m6A CDS//intron       27773535//27773536
chr1:154562703-154562704(-) m6A CDS//intron       27773535//27773536
chr1:154569297-154569298(-) m6A CDS       27773535//22575960
chr1:154569379-154569380(-) m6A CDS       27773535//22575960
chr1:154569711-154569712(-) m6A CDS       26404942//22575960
chr1:154570308-154570309(-) m6A CDS       24284625//27773535
chr1:154570354-154570355(-) m6A CDS       24284625//27773535
chr1:154570436-154570437(-) m6A CDS       24284625//24981863//28052920//26404942//27773535//27371828//27773536
chr1:154570932-154570933(-) m6A CDS       24284625//24981863//28052920//26404942//27773535//27371828//27773536
chr1:154572662-154572663(-) m6A exon//intron       24284625//24981863
chr1:154572732-154572733(-) m6A exon//intron       24284625//24981863
chr1:154572976-154572977(-) m6A exon//intron       27371828
chr1:154573020-154573021(-) m6A exon//intron       27371828
chr1:154573045-154573046(-) m6A exon//intron       27371828
chr1:154573062-154573063(-) m6A exon//intron       27371828
chr1:154573305-154573306(-) m6A exon//intron       27773535
chr1:154573326-154573327(-) m6A exon//intron       24284625//27773535
chr1:154573333-154573334(-) m6A exon//intron       24284625//27773535
chr1:154573497-154573498(-) m6A exon//intron       24284625//24981863//27773535//22575960//22608085
chr1:154573508-154573509(-) m6A exon//intron       24284625//24981863//27773535//22575960//22608085
chr1:154573521-154573522(-) m6A CDS//exon       24284625//24981863//26404942//27773535//27371828//22575960//22608085
chr1:154573533-154573534(-) m6A CDS//exon       24284625//24981863//26404942//27773535//27371828//22575960//22608085
chr1:154573565-154573566(-) m6A CDS//exon       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr1:154573609-154573610(-) m6A CDS//exon       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154573632-154573633(-) m6A CDS//exon       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154573818-154573819(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154573824-154573825(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154573833-154573834(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154573839-154573840(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154573855-154573856(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr1:154573875-154573876(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr1:154573970-154573971(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr1:154573994-154573995(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr1:154574008-154574009(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154574047-154574048(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154574075-154574076(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154574082-154574083(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr1:154574233-154574234(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr1:154574278-154574279(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr1:154574286-154574287(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr1:154574299-154574300(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085
chr1:154574305-154574306(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085
chr1:154574329-154574330(-) m6A 5'UTR//CDS//exon       24284625//24981863//27773535//27371828//27773536//22575960//22608085
chr1:154574334-154574335(-) m6A 5'UTR//CDS//exon       24284625//24981863//27773535//27371828//27773536//22575960//22608085
chr1:154574356-154574357(-) m6A 5'UTR//CDS//exon       24284625//24981863//27773535//27371828//27773536//22575960//22608085
chr1:154574419-154574420(-) m6A 5'UTR//CDS//exon       24284625//24981863//27371828//27773536//22575960//22608085
chr1:154574425-154574426(-) m6A 5'UTR//CDS//exon       24284625//24981863//27371828//27773536//22575960//22608085
chr1:154574433-154574434(-) m6A 5'UTR//CDS//exon       24284625//24981863//27371828//27773536//22575960//22608085
chr1:154574446-154574447(-) m6A 5'UTR//CDS//exon       24284625//24981863//27371828//27773536//22575960//22608085
chr1:154574452-154574453(-) m6A 5'UTR//CDS//exon       24284625//24981863//27371828//27773536//22575960//22608085
chr1:154574481-154574482(-) m6A 5'UTR//CDS//exon       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr1:154574503-154574504(-) m6A 5'UTR//CDS//exon       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr1:154574546-154574547(-) m6A 5'UTR//CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr1:154574618-154574619(-) m6A 5'UTR//CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr1:154574625-154574626(-) m6A 5'UTR//CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr1:154574697-154574698(-) m6A 5'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr1:154574721-154574722(-) m6A 5'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr1:154574851-154574852(-) m6A 5'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//27773536//22575960//22608085
chr1:154574907-154574908(-) m6A 5'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27371828//22575960//22608085
chr1:154574936-154574937(-) m6A 5'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27371828//22575960//22608085
chr1:154575048-154575049(-) m6A 5'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr1:154580630-154580631(-) m6A 5'UTR//intron       24209618//24981863//27371828//27773536//22575960
chr1:154580659-154580660(-) m6A 5'UTR//intron       24209618//24981863//27371828//27773536
chr1:154581254-154581255(-) m6A exon//intron       24209618//24981863
chr1:154600334-154600335(-) m6A 5'UTR//exon//intron       24209618//24981863
chr1:154600449-154600450(-) m6A exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ADAR
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H14-3p
Interactor2: ADAR

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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