Detail Information

Basic Information:


  VIRBase ID:  

VHID00115442

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:           ACVRL1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H14-3p ACVRL1
miRBase
Accession/Entrez ID
MIMAT0014692 94
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - ACVRLK1//ALK-1//ALK1//HHT//HHT2//ORW2//SKR3//TSR-I

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ACVRL1
chr12:52315565(+) A-I      3'UTR
chr12:52315603(+) A-I      3'UTR
chr12:52315662(+) A-I      3'UTR
chr12:52315656(+) A-I      3'UTR
chr12:52315610(+) A-I      3'UTR
chr12:52315597(+) A-I      3'UTR
chr12:52315578(+) A-I      3'UTR
chr12:52315573(+) A-I      3'UTR
chr12:52315664(+) A-I      3'UTR
chr12:52313398(+) A-I      intronic
chr12:52313289(+) A-I      intronic
chr12:52313279(+) A-I      intronic
chr12:52313249(+) A-I      intronic
chr12:52315287(+) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ACVRL1
chr12:52309956-52309957(+) m6A CDS//exon       -
chr12:52310004-52310005(+) m6A CDS//exon       -
chr12:52312780-52312781(+) m6A CDS//exon       -
chr12:52312787-52312788(+) m6A CDS//exon       -
chr12:52316941-52316942(+) m6A 3'UTR//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ACVRL1
Cytosol HeLa-S3 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H14-3p
Interactor2: ACVRL1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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