Detail Information

Basic Information:


  VIRBase ID:  

VHID00115437

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-3p:           ACP5:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H14-3p ACP5
miRBase
Accession/Entrez ID
MIMAT0014692 54
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - HPAP//TRACP5a//TRACP5b//TRAP//TrATPase

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ACP5
chr19:11685627-11685628(-) m6A 3'UTR       25456834//24981863//28052920//27773535//27371828
chr19:11685637-11685638(-) m6A 3'UTR       25456834//24981863//28052920//27773535//27371828
chr19:11685685-11685686(-) m6A 3'UTR       25456834//28052920//27773535//27371828
chr19:11685698-11685699(-) m6A 3'UTR       25456834//28052920//27773535//27371828
chr19:11685760-11685761(-) m6A 3'UTR       25456834//24981863//27773535//27371828
chr19:11685823-11685824(-) m6A 3'UTR       25456834//24981863//27773535//27371828
chr19:11685853-11685854(-) m6A 3'UTR//CDS       25456834//24981863//27773535//27371828
chr19:11685942-11685943(-) m6A CDS       27773535//27371828
chr19:11685949-11685950(-) m6A CDS       27773535//27371828
chr19:11686008-11686009(-) m6A CDS       27773535//27371828
chr19:11687325-11687326(-) m6A CDS//exon//intron       27773535
chr19:11687356-11687357(-) m6A CDS//exon//intron       27773535
chr19:11687400-11687401(-) m6A CDS//exon//intron       27773535
chr19:11687449-11687450(-) m6A exon//intron       27773535
chr19:11687483-11687484(-) m6A exon//intron       27773535
chr19:11687590-11687591(-) m6A CDS//exon//intron       27773535
chr19:11687654-11687655(-) m6A CDS//exon//intron       27773535
chr19:11688127-11688128(-) m6A CDS//exon       27371828
chr19:11688476-11688477(-) m6A 5'UTR//exon       27371828
chr19:11688531-11688532(-) m6A 5'UTR//intron       27371828
chr19:11688546-11688547(-) m6A 5'UTR//intron       27371828
chr19:11688982-11688983(-) m6A 5'UTR//intron       27371828
chr19:11689460-11689461(-) m6A 5'UTR//exon//intron       27371828
chr19:11689469-11689470(-) m6A 5'UTR//exon//intron       27371828
chr19:11689561-11689562(-) m6A 5'UTR//intron       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ACP5
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H14-3p
Interactor2: ACP5

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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