Basic Information:

  VIRBase ID:  

VHID00115108

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-5p:  MIMAT0014691          LYSMD4:  NM_001284422     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-5p	LYSMD4
miRBase Accession/Entrez ID	MIMAT0014691	145748
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LYSMD4	chr15:100255977-100255978(-) m6A 3'UTR//exon       27773535 chr15:100255990-100255991(-) m6A 3'UTR//exon       27773535 chr15:100256057-100256058(-) m6A 3'UTR//exon       27773535 chr15:100256093-100256094(-) m6A 3'UTR//exon       27773535 chr15:100256420-100256421(-) m6A 3'UTR//exon       24981863 chr15:100256434-100256435(-) m6A 3'UTR//exon       24981863 chr15:100256457-100256458(-) m6A 3'UTR//exon       24981863//22608085 chr15:100256565-100256566(-) m6A 3'UTR//exon       24981863//22608085 chr15:100257087-100257088(-) m6A 5'UTR//exon       27773535//22608085 chr15:100257098-100257099(-) m6A 5'UTR//exon       27773535//22608085 chr15:100257119-100257120(-) m6A 5'UTR//exon       27773535//22608085 chr15:100257189-100257190(-) m6A 5'UTR//exon       27773535//22608085 chr15:100257408-100257409(-) m6A 5'UTR//exon       27773535//22608085 chr15:100257426-100257427(-) m6A 5'UTR//exon       27773535//22608085 chr15:100257531-100257532(-) m6A 5'UTR//exon       22608085 chr15:100261056-100261057(-) m6A exon//intron       25456834//27773535 chr15:100261083-100261084(-) m6A exon//intron       25456834//27773535 chr15:100261105-100261106(-) m6A exon//intron       25456834//27773535 chr15:100261123-100261124(-) m6A exon//intron       25456834 chr15:100268016-100268017(-) m6A 3'UTR//exon//intron       25456834 chr15:100268042-100268043(-) m6A 3'UTR//exon//intron       25456834//22608085 chr15:100268053-100268054(-) m6A 3'UTR//exon//intron       25456834//22608085 chr15:100268150-100268151(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr15:100268158-100268159(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr15:100268240-100268241(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr15:100268288-100268289(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr15:100268295-100268296(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr15:100268724-100268725(-) m6A 3'UTR//exon//intron       24981863 chr15:100268730-100268731(-) m6A 3'UTR//exon//intron       24981863 chr15:100268983-100268984(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr15:100269035-100269036(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269064-100269065(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269133-100269134(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr15:100269217-100269218(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr15:100269311-100269312(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269347-100269348(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269364-100269365(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269399-100269400(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr15:100269460-100269461(-) m6A CDS//exon//intron       24284625//24209618//25456834//27773535//22608085 chr15:100269476-100269477(-) m6A CDS//exon//intron       24284625//24209618//25456834//27773535//22608085 chr15:100269637-100269638(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269760-100269761(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269774-100269775(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269791-100269792(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269816-100269817(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269822-100269823(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269833-100269834(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr15:100269853-100269854(-) m6A 5'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr15:100269892-100269893(-) m6A 5'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr15:100269897-100269898(-) m6A 5'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr15:100272082-100272083(-) m1A 5'UTR//CDS//exon//intron       26863196 chr15:100272094-100272095(-) m6A 5'UTR//CDS//exon//intron       - chr15:100272103-100272104(-) m6A 5'UTR//CDS//exon//intron       - chr15:100272146-100272147(-) m6A 5'UTR//CDS//exon//intron       24209618 chr15:100272176-100272177(-) m6A 5'UTR//CDS//exon//intron       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LYSMD4	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-5p
Interactor2: LYSMD4

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid
Support Database	RepTar//VmiReg