Basic Information:

  VIRBase ID:  

VHID00114915

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-5p:  MIMAT0014691          EFCAB12:  NM_207307     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-5p	EFCAB12
miRBase Accession/Entrez ID	MIMAT0014691	90288
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C3orf25

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EFCAB12	chr3:129124864(-) A-I      intronic chr3:129130619(-) A-I      intronic chr3:129130649(-) A-I      intronic chr3:129130653(-) A-I      intronic chr3:129130655(-) A-I      intronic chr3:129130667(-) A-I      intronic chr3:129130688(-) A-I      intronic chr3:129126674(-) A-I      intronic chr3:129126671(-) A-I      intronic chr3:129125618(-) A-I      intronic chr3:129125610(-) A-I      intronic chr3:129135985(-) A-I      intronic chr3:129129236(-) A-I      intronic chr3:129125470(-) A-I      intronic chr3:129125467(-) A-I      intronic chr3:129125457(-) A-I      intronic chr3:129124826(-) A-I      intronic chr3:129124821(-) A-I      intronic chr3:129124811(-) A-I      intronic chr3:129142395(-) A-I      intronic chr3:129142433(-) A-I      intronic chr3:129129232(-) A-I      intronic chr3:129126681(-) A-I      intronic chr3:129125841(-) A-I      intronic chr3:129123884(-) A-I      intronic chr3:129125540(-) A-I      intronic chr3:129125549(-) A-I      intronic chr3:129124808(-) A-I      intronic chr3:129125542(-) A-I      intronic chr3:129123823(-) A-I      intronic chr3:129125428(-) A-I      intronic chr3:129125500(-) A-I      intronic chr3:129134921(-) A-I      intronic chr3:129125388(-) A-I      intronic chr3:129136105(-) A-I      intronic chr3:129125621(-) A-I      intronic chr3:129128121(-) A-I      intronic chr3:129123824(-) A-I      intronic chr3:129123904(-) A-I      intronic chr3:129125483(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EFCAB12	chr3:129120286-129120287(-) m6A 3'UTR//exon       - chr3:129120308-129120309(-) m6A 3'UTR//exon       - chr3:129120337-129120338(-) m6A 3'UTR//exon       - chr3:129120363-129120364(-) m6A 3'UTR//exon       - chr3:129120414-129120415(-) m6A 3'UTR//exon       24981863//27773535 chr3:129120487-129120488(-) m6A CDS//exon       24981863//27773535 chr3:129120493-129120494(-) m6A CDS//exon       24981863//27773535 chr3:129120583-129120584(-) m6A CDS//exon       27773535 chr3:129133400-129133401(-) m6A exon//intron       27773535 chr3:129133410-129133411(-) m6A exon//intron       27773535 chr3:129133418-129133419(-) m6A exon//intron       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EFCAB12	Cytosol K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-5p
Interactor2: EFCAB12

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid
Support Database	RepTar//VmiReg