Detail Information

Basic Information:


  VIRBase ID:  

VHID00114638

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-5p:           DMRTA2:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H14-5p DMRTA2
miRBase
Accession/Entrez ID
MIMAT0014691 63950
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DMRTA2
chr1:50883339-50883340(-) m6A 3'UTR       24981863
chr1:50883374-50883375(-) m6A 3'UTR       24981863
chr1:50883400-50883401(-) m6A 3'UTR       24981863
chr1:50883486-50883487(-) m6A 3'UTR       24981863
chr1:50883535-50883536(-) m6A 3'UTR       24981863
chr1:50883555-50883556(-) m6A 3'UTR       24981863
chr1:50883571-50883572(-) m6A 3'UTR       24981863
chr1:50883580-50883581(-) m6A 3'UTR       24981863
chr1:50884147-50884148(-) m6A 3'UTR       27773536
chr1:50884297-50884298(-) m6A 3'UTR       27773536
chr1:50884303-50884304(-) m6A 3'UTR       27773536
chr1:50884460-50884461(-) m6A CDS       27773536
chr1:50884714-50884715(-) m6A CDS       27773536
chr1:50884910-50884911(-) m6A CDS       27773536
chr1:50885138-50885139(-) m6A CDS       27773536
chr1:50885297-50885298(-) m6A CDS       27773536
chr1:50886682-50886683(-) m6A CDS       27773536
chr1:50886707-50886708(-) m6A CDS       27773536
chr1:50886930-50886931(-) m6A CDS       24981863//27773536
chr1:50887009-50887010(-) m6A CDS       27773536
chr1:50888923-50888924(-) m6A 5'UTR       24981863//27773536
chr1:50888957-50888958(-) m6A 5'UTR       27773536
chr1:50889044-50889045(-) m6A 5'UTR       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DMRTA2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H14-5p
Interactor2: DMRTA2

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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