Basic Information:

  VIRBase ID:  

VHID00114480

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-5p:  MIMAT0014691          XKR8:  NM_018053     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-5p	XKR8
miRBase Accession/Entrez ID	MIMAT0014691	55113
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	hXkr8//XRG8

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	XKR8	chr1:28290745(+) A-I      ncRNA chr1:28290694(+) A-I      intronic chr1:28288884(+) A-I      intronic chr1:28288807(+) A-I      intronic chr1:28288901(+) A-I      intronic chr1:28289105(+) A-I      intronic chr1:28288830(+) A-I      intronic chr1:28288956(+) A-I      intronic chr1:28289288(+) A-I      intronic chr1:28289326(+) A-I      intronic chr1:28289696(+) A-I      intronic chr1:28288929(+) A-I      intronic chr1:28289738(+) A-I      intronic chr1:28289005(+) A-I      intronic chr1:28287273(+) A-I      intronic chr1:28287592(+) A-I      intronic chr1:28288920(+) A-I      intronic chr1:28289805(+) A-I      intronic chr1:28289637(+) A-I      intronic chr1:28289365(+) A-I      intronic chr1:28289674(+) A-I      intronic chr1:28289635(+) A-I      intronic chr1:28289242(+) A-I      intronic chr1:28289701(+) A-I      intronic chr1:28288865(+) A-I      intronic chr1:28289634(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	XKR8	chr1:28286334-28286335(+) m6A 5'UTR       25456834 chr1:28286396-28286397(+) m6A 5'UTR       25456834 chr1:28286403-28286404(+) m6A 5'UTR       25456834 chr1:28293142-28293143(+) m6A CDS//exon       - chr1:28293271-28293272(+) m6A CDS       25456834//24981863//22608085 chr1:28293283-28293284(+) m6A CDS       25456834//24981863//22608085 chr1:28293634-28293635(+) m6A CDS       25456834//24981863//22608085 chr1:28293740-28293741(+) m6A 3'UTR       25456834//24981863//22608085 chr1:28293913-28293914(+) m6A 3'UTR       25456834//24981863//22608085 chr1:28293967-28293968(+) m6A 3'UTR       25456834//24981863//22608085 chr1:28293987-28293988(+) m6A 3'UTR       25456834//24981863//22608085 chr1:28294029-28294030(+) m6A 3'UTR       25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	XKR8	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-5p
Interactor2: XKR8

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid
Support Database	RepTar//VmiReg