Basic Information:

  VIRBase ID:  

VHID00114390

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-5p:  MIMAT0014691          TMEM69:  NM_016486     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-5p	TMEM69
miRBase Accession/Entrez ID	MIMAT0014691	51249
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C1orf154

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMEM69	chr1:46156031(+) A-I      intronic chr1:46155344(+) A-I      intronic chr1:46156024(+) A-I      intronic chr1:46156053(+) A-I      intronic chr1:46155964(+) A-I      intronic chr1:46155529(+) A-I      intronic chr1:46155990(+) A-I      intronic chr1:46155356(+) A-I      intronic chr1:46154779(+) A-I      intronic chr1:46154693(+) A-I      intronic chr1:46154680(+) A-I      intronic chr1:46154676(+) A-I      intronic chr1:46154656(+) A-I      intronic chr1:46156016(+) A-I      intronic chr1:46154757(+) A-I      intronic chr1:46155283(+) A-I      intronic chr1:46155475(+) A-I      intronic chr1:46155422(+) A-I      intronic chr1:46155492(+) A-I      intronic chr1:46155265(+) A-I      intronic chr1:46155332(+) A-I      intronic chr1:46155444(+) A-I      intronic chr1:46155430(+) A-I      intronic chr1:46155427(+) A-I      intronic chr1:46155381(+) A-I      intronic chr1:46155276(+) A-I      intronic chr1:46155357(+) A-I      intronic chr1:46155467(+) A-I      intronic chr1:46155363(+) A-I      intronic chr1:46155412(+) A-I      intronic chr1:46155241(+) A-I      intronic chr1:46155451(+) A-I      intronic chr1:46155325(+) A-I      intronic chr1:46155353(+) A-I      intronic chr1:46154823(+) A-I      intronic chr1:46155395(+) A-I      intronic chr1:46156123(+) A-I      intronic chr1:46156023(+) A-I      intronic chr1:46155455(+) A-I      intronic chr1:46155497(+) A-I      intronic chr1:46154632(+) A-I      intronic chr1:46155360(+) A-I      intronic chr1:46154742(+) A-I      intronic chr1:46155286(+) A-I      intronic chr1:46155298(+) A-I      intronic chr1:46155612(+) A-I      intronic chr1:46154751(+) A-I      intronic chr1:46155399(+) A-I      intronic chr1:46155114(+) A-I      intronic chr1:46155389(+) A-I      intronic chr1:46155259(+) A-I      intronic chr1:46155116(+) A-I      intronic chr1:46154804(+) A-I      intronic chr1:46155358(+) A-I      intronic chr1:46155403(+) A-I      intronic chr1:46154640(+) A-I      intronic chr1:46154650(+) A-I      intronic chr1:46155347(+) A-I      intronic chr1:46155260(+) A-I      intronic chr1:46154854(+) A-I      intronic chr1:46155281(+) A-I      intronic chr1:46154827(+) A-I      intronic chr1:46155546(+) A-I      intronic chr1:46155123(+) A-I      intronic chr1:46154741(+) A-I      intronic chr1:46155295(+) A-I      intronic chr1:46154715(+) A-I      intronic chr1:46156106(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TMEM69	chr1:46155241(+) A-I intron -    22028664 chr1:46155259(+) A-I intron -    22028664 chr1:46155265(+) A-I intron -    22028664 chr1:46155276(+) A-I intron -    22028664 chr1:46155281(+) A-I intron -    22028664 chr1:46155283(+) A-I intron -    22028664 chr1:46155286(+) A-I intron -    22028664 chr1:46155295(+) A-I intron -    22028664 chr1:46155298(+) A-I intron -    22028664 chr1:46155325(+) A-I intron -    22028664 chr1:46155332(+) A-I intron -    22028664 chr1:46155347(+) A-I intron -    22028664 chr1:46155357(+) A-I intron -    22028664 chr1:46155358(+) A-I intron -    22028664 chr1:46155359(+) A-I intron -    22028664 chr1:46155360(+) A-I intron -    22028664 chr1:46155363(+) A-I intron -    22028664 chr1:46155381(+) A-I intron -    22028664 chr1:46155389(+) A-I intron -    22028664 chr1:46155395(+) A-I intron -    22028664 chr1:46155399(+) A-I intron -    22028664 chr1:46155403(+) A-I intron -    22028664 chr1:46155412(+) A-I intron -    22028664 chr1:46155422(+) A-I intron -    22028664 chr1:46155427(+) A-I intron -    22028664 chr1:46155430(+) A-I intron -    22028664 chr1:46155444(+) A-I intron -    22028664 chr1:46155451(+) A-I intron -    22028664 chr1:46155455(+) A-I intron -    22028664 chr1:46155467(+) A-I intron -    22028664 chr1:46155475(+) A-I intron -    22028664 chr1:46155492(+) A-I intron -    22028664 chr1:46155497(+) A-I intron -    22028664 chr1:46155259(+) A-G intron -    22484847 chr1:46155260(+) A-G intron -    22484847 chr1:46155281(+) A-G intron -    22484847 chr1:46155298(+) A-G intron -    22484847 chr1:46155321(+) T-C intron -    22484847 chr1:46155358(+) A-G intron -    22484847 chr1:46155389(+) A-G intron -    22484847 chr1:46155546(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM69	chr1:46153192-46153193(+) m6A 5'UTR       - chr1:46153235-46153236(+) m6A 5'UTR       - chr1:46153257-46153258(+) m6A 5'UTR       - chr1:46153325-46153326(+) m6A 5'UTR       - chr1:46153806-46153807(+) m6A 5'UTR       24981863 chr1:46153878-46153879(+) m6A 5'UTR//exon       24981863 chr1:46156647-46156648(+) m6A 5'UTR//intron       24981863 chr1:46158901-46158902(+) m6A CDS//exon       24284625 chr1:46158908-46158909(+) m6A CDS//exon       24284625 chr1:46158917-46158918(+) m6A CDS//exon       24284625 chr1:46158954-46158955(+) m6A CDS//exon       24284625 chr1:46159013-46159014(+) m6A CDS//exon       24284625//24981863 chr1:46159078-46159079(+) m6A CDS//exon       24284625//24981863 chr1:46159144-46159145(+) m6A CDS//exon       24284625//24981863 chr1:46159190-46159191(+) m6A CDS//exon       24284625//24981863 chr1:46159300-46159301(+) m6A CDS//exon       24284625 chr1:46159305-46159306(+) m6A CDS//exon       24284625 chr1:46159375-46159376(+) m6A CDS//exon       24284625 chr1:46159432-46159433(+) m6A CDS//exon       24284625 chr1:46159552-46159553(+) m6A CDS       24284625//24981863//22608085 chr1:46159561-46159562(+) m6A CDS       24284625//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM69	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-5p
Interactor2: TMEM69

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid
Support Database	RepTar//VmiReg