Basic Information:

  VIRBase ID:  

VHID00114205

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H14-5p:  MIMAT0014691          XPO6:  NM_001270940     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H14-5p	XPO6
miRBase Accession/Entrez ID	MIMAT0014691	23214
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EXP6//RANBP20

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	XPO6	chr16:28180055(-) A-I      intronic chr16:28147701(-) A-I      intronic chr16:28147669(-) A-I      intronic chr16:28179584(-) A-I      intronic chr16:28179742(-) A-I      intronic chr16:28180173(-) A-I      intronic chr16:28129864(-) A-I      intronic chr16:28129861(-) A-I      intronic chr16:28129860(-) A-I      intronic chr16:28177679(-) A-I      intronic chr16:28147745(-) A-I      intronic chr16:28153234(-) A-I      intronic chr16:28179562(-) A-I      intronic chr16:28147720(-) A-I      intronic chr16:28147719(-) A-I      intronic chr16:28147718(-) A-I      intronic chr16:28131341(-) A-I      intronic chr16:28131342(-) A-I      intronic chr16:28131345(-) A-I      intronic chr16:28131359(-) A-I      intronic chr16:28177717(-) A-I      intronic chr16:28177758(-) A-I      intronic chr16:28179747(-) A-I      intronic chr16:28211377(-) A-I      intronic chr16:28134512(-) A-I      intronic chr16:28133771(-) A-I      intronic chr16:28133698(-) A-I      intronic chr16:28131385(-) A-I      intronic chr16:28131370(-) A-I      intronic chr16:28131369(-) A-I      intronic chr16:28211395(-) A-I      intronic chr16:28177775(-) A-I      intronic chr16:28153194(-) A-I      intronic chr16:28134515(-) A-I      intronic chr16:28134526(-) A-I      intronic chr16:28134565(-) A-I      intronic chr16:28134656(-) A-I      intronic chr16:28134671(-) A-I      intronic chr16:28147673(-) A-I      intronic chr16:28147787(-) A-I      intronic chr16:28153114(-) A-I      intronic chr16:28153123(-) A-I      intronic chr16:28153159(-) A-I      intronic chr16:28154016(-) A-I      intronic chr16:28154069(-) A-I      intronic chr16:28154070(-) A-I      intronic chr16:28154072(-) A-I      intronic chr16:28173975(-) A-I      intronic chr16:28176532(-) A-I      intronic chr16:28176536(-) A-I      intronic chr16:28177706(-) A-I      intronic chr16:28179554(-) A-I      intronic chr16:28179602(-) A-I      intronic chr16:28179756(-) A-I      intronic chr16:28179924(-) A-I      intronic chr16:28180006(-) A-I      intronic chr16:28180038(-) A-I      intronic chr16:28180051(-) A-I      intronic chr16:28189723(-) A-I      intronic chr16:28189777(-) A-I      intronic chr16:28190612(-) A-I      intronic chr16:28190617(-) A-I      intronic chr16:28196674(-) A-I      intronic chr16:28196681(-) A-I      intronic chr16:28196682(-) A-I      intronic chr16:28197805(-) A-I      intronic chr16:28197814(-) A-I      intronic chr16:28197856(-) A-I      intronic chr16:28210239(-) A-I      intronic chr16:28210260(-) A-I      intronic chr16:28210378(-) A-I      intronic chr16:28210423(-) A-I      intronic chr16:28210814(-) A-I      intronic chr16:28210816(-) A-I      intronic chr16:28210879(-) A-I      intronic chr16:28210889(-) A-I      intronic chr16:28211020(-) A-I      intronic chr16:28211160(-) A-I      intronic chr16:28210262(-) A-I      intronic chr16:28147678(-) A-I      intronic chr16:28210221(-) A-I      intronic chr16:28190018(-) A-I      intronic chr16:28154030(-) A-I      intronic chr16:28196650(-) A-I      intronic chr16:28153092(-) A-I      intronic chr16:28221338(-) A-I      intronic chr16:28179543(-) A-I      intronic chr16:28210220(-) A-I      intronic chr16:28180209(-) A-I      intronic chr16:28210222(-) A-I      intronic chr16:28198108(-) A-I      intronic chr16:28210310(-) A-I      intronic chr16:28179762(-) A-I      intronic chr16:28177753(-) A-I      intronic chr16:28154068(-) A-I      intronic chr16:28134701(-) A-I      intronic chr16:28174076(-) A-I      intronic chr16:28179692(-) A-I      intronic chr16:28147760(-) A-I      intronic chr16:28153169(-) A-I      intronic chr16:28210720(-) A-I      intronic chr16:28210339(-) A-I      intronic chr16:28180039(-) A-I      intronic chr16:28180087(-) A-I      intronic chr16:28210764(-) A-I      intronic chr16:28180224(-) A-I      intronic chr16:28131295(-) A-I      intronic chr16:28188103(-) A-I      intronic chr16:28180215(-) A-I      intronic chr16:28198065(-) A-I      intronic chr16:28179601(-) A-I      intronic chr16:28179588(-) A-I      intronic chr16:28196581(-) A-I      intronic chr16:28211394(-) A-I      intronic chr16:28180163(-) A-I      intronic chr16:28131445(-) A-I      intronic chr16:28189717(-) A-I      intronic chr16:28179704(-) A-I      intronic chr16:28131412(-) A-I      intronic chr16:28176316(-) A-I      intronic chr16:28179795(-) A-I      intronic chr16:28179553(-) A-I      intronic chr16:28211915(-) A-I      intronic chr16:28197786(-) A-I      intronic chr16:28147679(-) A-I      intronic chr16:28159144(-) A-I      intronic chr16:28210766(-) A-I      intronic chr16:28134708(-) A-I      intronic chr16:28189879(-) A-I      intronic chr16:28147813(-) A-I      intronic chr16:28179561(-) A-I      intronic chr16:28180037(-) A-I      intronic chr16:28133868(-) A-I      intronic chr16:28179721(-) A-I      intronic chr16:28113896(-) A-I      intronic chr16:28179798(-) A-I      intronic chr16:28180034(-) A-I      intronic chr16:28133817(-) A-I      intronic chr16:28154985(-) A-I      intronic chr16:28210248(-) A-I      intronic chr16:28111562(-) A-I      intronic chr16:28179589(-) A-I      intronic chr16:28210353(-) A-I      intronic chr16:28159111(-) A-I      intronic chr16:28129877(-) A-I      intronic chr16:28210870(-) A-I      intronic chr16:28180047(-) A-I      intronic chr16:28180020(-) A-I      intronic chr16:28111446(-) A-I      intronic chr16:28154071(-) A-I      intronic chr16:28192941(-) A-I      intronic chr16:28189887(-) A-I      intronic chr16:28179632(-) A-I      intronic chr16:28198132(-) A-I      intronic chr16:28180076(-) A-I      intronic chr16:28197942(-) A-I      intronic chr16:28180144(-) A-I      intronic chr16:28211025(-) A-I      intronic chr16:28189885(-) A-I      intronic chr16:28179595(-) A-I      intronic chr16:28211365(-) A-I      intronic chr16:28154088(-) A-I      intronic chr16:28211026(-) A-I      intronic chr16:28179682(-) A-I      intronic chr16:28133751(-) A-I      intronic chr16:28217611(-) A-I      intronic chr16:28190222(-) A-I      intronic chr16:28180168(-) A-I      intronic chr16:28210235(-) A-I      intronic chr16:28179609(-) A-I      intronic chr16:28134591(-) A-I      intronic chr16:28210352(-) A-I      intronic chr16:28211137(-) A-I      intronic chr16:28189884(-) A-I      intronic chr16:28211355(-) A-I      intronic chr16:28211138(-) A-I      intronic chr16:28179549(-) A-I      intronic chr16:28133806(-) A-I      intronic chr16:28179695(-) A-I      intronic chr16:28179752(-) A-I      intronic chr16:28211908(-) A-I      intronic chr16:28147814(-) A-I      intronic chr16:28179988(-) A-I      intronic chr16:28201770(-) A-I      intronic chr16:28182534(-) A-I      intronic chr16:28170469(-) A-I      intronic chr16:28179991(-) A-I      intronic chr16:28176531(-) A-I      intronic chr16:28179680(-) A-I      intronic chr16:28179754(-) A-I      intronic chr16:28118948(-) A-I      NonSyn:Asn->Asp chr16:28210765(-) A-I      intronic chr16:28133812(-) A-I      intronic chr16:28180061(-) A-I      intronic chr16:28210285(-) A-I      intronic chr16:28197928(-) A-I      intronic chr16:28179571(-) A-I      intronic chr16:28179958(-) A-I      intronic chr16:28154006(-) A-I      intronic chr16:28173916(-) A-I      intronic chr16:28177714(-) A-I      intronic chr16:28113893(-) A-I      intronic chr16:28129909(-) A-I      intronic chr16:28199519(-) A-I      intronic chr16:28179934(-) A-I      intronic chr16:28179736(-) A-I      intronic chr16:28154065(-) A-I      intronic chr16:28212086(-) A-I      intronic chr16:28147608(-) A-I      intronic chr16:28210208(-) A-I      intronic chr16:28212068(-) A-I      intronic chr16:28153218(-) A-I      intronic chr16:28134674(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	XPO6	chr16:28118948(-) A-I exon CDS    19478186 chr16:28179798(-) A-I intron -    22327324 chr16:28180163(-) A-I intron -    22327324 chr16:28180215(-) A-I intron -    22327324 chr16:28180224(-) A-I intron -    22327324 chr16:28210208(-) A-I intron -    22028664 chr16:28210220(-) A-I intron -    22028664 chr16:28210221(-) A-I intron -    22028664 chr16:28210222(-) A-I intron -    22028664 chr16:28210235(-) A-I intron -    22028664 chr16:28210262(-) A-I intron -    22028664 chr16:28210285(-) A-I intron -    22028664 chr16:28210310(-) A-I intron -    22028664 chr16:28210339(-) A-I intron -    22028664 chr16:28210353(-) A-I intron -    22028664 chr16:28179752(-) A-G intron -    22484847 chr16:28179795(-) A-G intron -    22484847 chr16:28179798(-) A-G intron -    22484847 chr16:28179991(-) A-G intron -    22484847 chr16:28180034(-) A-G intron -    22484847 chr16:28180037(-) A-G intron -    22484847 chr16:28180087(-) A-G intron -    22484847 chr16:28180163(-) A-G intron -    22484847 chr16:28180215(-) A-G intron -    22484847 chr16:28180224(-) A-G intron -    22484847 chr16:28210720(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	XPO6	chr16:28109347-28109348(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr16:28109394-28109395(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr16:28109472-28109473(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr16:28109531-28109532(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:28109569-28109570(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr16:28109833-28109834(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr16:28109839-28109840(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:28109900-28109901(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:28112480-28112481(-) m6A 3'UTR//intron       24284625 chr16:28113199-28113200(-) m6A CDS//exon       27773535 chr16:28113221-28113222(-) m6A CDS//exon       24284625//27773535 chr16:28113257-28113258(-) m6A CDS//exon       24284625//27773535 chr16:28123271-28123272(-) m6A 3'UTR//CDS//intron       22575960 chr16:28143707-28143708(-) m6A CDS//exon       27371828 chr16:28146550-28146551(-) m6A CDS//exon       24981863//27371828//22575960 chr16:28146607-28146608(-) Y CDS//exon       26075521 chr16:28164178-28164179(-) m6A exon//intron       27773535//22608085 chr16:28167273-28167274(-) m6A exon//intron       24284625//24981863//22608085 chr16:28167473-28167474(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:28167523-28167524(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:28167537-28167538(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:28167598-28167599(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr16:28167804-28167805(-) m6A CDS//exon       27773535 chr16:28192341-28192342(-) m1A 5'UTR//CDS//intron       26863410 chr16:28222723-28222724(-) m6A 5'UTR       - chr16:28222756-28222757(-) m6A 5'UTR       - chr16:28222768-28222769(-) m6A 5'UTR       - chr16:28222787-28222788(-) m6A 5'UTR       - chr16:28222951-28222952(-) Y 5'UTR       26075521 chr16:28223158-28223159(-) m6A 5'UTR       25456834//24981863//27371828//27773536//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	XPO6	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H14-5p
Interactor2: XPO6

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg