Basic Information:

  VIRBase ID:  

VHID00111030

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H12:  MIMAT0014689          RHBDL2:  NM_017821     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H12	RHBDL2
miRBase Accession/Entrez ID	MIMAT0014689	54933
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	RRP2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RHBDL2	chr1:39376626(-) A-I      intronic chr1:39376624(-) A-I      intronic chr1:39376618(-) A-I      intronic chr1:39376615(-) A-I      intronic chr1:39355947(-) A-I      intronic chr1:39376589(-) A-I      intronic chr1:39376630(-) A-I      intronic chr1:39376633(-) A-I      intronic chr1:39376693(-) A-I      intronic chr1:39376723(-) A-I      intronic chr1:39351790(-) A-I      3'UTR chr1:39351827(-) A-I      3'UTR chr1:39351829(-) A-I      3'UTR chr1:39351839(-) A-I      3'UTR chr1:39376629(-) A-I      intronic chr1:39367966(-) A-I      intronic chr1:39367985(-) A-I      intronic chr1:39353276(-) A-I      intronic chr1:39367980(-) A-I      intronic chr1:39367970(-) A-I      intronic chr1:39353273(-) A-I      intronic chr1:39367940(-) A-I      intronic chr1:39353279(-) A-I      intronic chr1:39377489(-) A-I      intronic chr1:39377681(-) A-I      intronic chr1:39377733(-) A-I      intronic chr1:39372206(-) A-I      intronic chr1:39370805(-) A-I      intronic chr1:39368505(-) A-I      intronic chr1:39368497(-) A-I      intronic chr1:39351844(-) A-I      3'UTR chr1:39351787(-) A-I      3'UTR chr1:39351845(-) A-I      3'UTR chr1:39351833(-) A-I      3'UTR chr1:39351853(-) A-I      3'UTR chr1:39390646(-) A-I      intronic chr1:39398405(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	RHBDL2	chr1:39386917(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RHBDL2	chr1:39352009-39352010(-) m6A 3'UTR       - chr1:39352041-39352042(-) m6A 3'UTR       - chr1:39352051-39352052(-) m6A 3'UTR       - chr1:39352056-39352057(-) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RHBDL2	Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H12
Interactor2: RHBDL2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA
Support Database	RepTar//VmiReg