Detail Information

Basic Information:


  VIRBase ID:  

VHID00110447

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H12:           IL1B:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H12 IL1B
miRBase
Accession/Entrez ID
MIMAT0014689 3553
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - IL-1//IL1-BETA//IL1beta//IL1F2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase IL1B
chr2:113590257-113590258(-) m6A CDS//exon       -
chr2:113590281-113590282(-) m6A CDS//exon       -
chr2:113593136-113593137(-) m6A exon//intron       27371828
chr2:113593151-113593152(-) m6A CDS//exon       27371828
chr2:113594350-113594351(-) m6A 5'UTR//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate IL1B
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H12
Interactor2: IL1B

Evidence Support:


Prediction-Evidence cRep//miRanda
Support Database RepTar//VmiReg

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