Basic Information:

  VIRBase ID:  

VHID00108692

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H11:  MIMAT0014688          IVNS1ABP:  NM_006469     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H11	IVNS1ABP
miRBase Accession/Entrez ID	MIMAT0014688	10625
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARA3//FLARA3//HSPC068//IMD70//KLHL39//ND1//NS-1//NS1-BP//NS1BP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IVNS1ABP	chr1:185269202(-) A-I      NonSyn:Lys->Arg

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	IVNS1ABP	chr1:185269202(-) A-I exon CDS    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IVNS1ABP	chr1:185265631-185265632(-) m6A 3'UTR//exon       27773535 chr1:185265637-185265638(-) m6A 3'UTR//exon       27773535 chr1:185265706-185265707(-) m6A 3'UTR//exon       27773535 chr1:185266747-185266748(-) m6A 3'UTR//exon       27773535 chr1:185266786-185266787(-) m6A 3'UTR//exon       27773535 chr1:185266919-185266920(-) m6A 3'UTR//exon       27773535 chr1:185266952-185266953(-) m6A 3'UTR//exon       27773535 chr1:185267026-185267027(-) m6A 3'UTR//exon       27773535 chr1:185267145-185267146(-) m6A 3'UTR//exon       26404942//27773535 chr1:185267155-185267156(-) m6A 3'UTR//exon       26404942//27773535 chr1:185267278-185267279(-) m6A CDS//exon       26404942//27773535//22575960 chr1:185267415-185267416(-) m6A CDS//exon       - chr1:185268898-185268899(-) m6A CDS//exon       26404942 chr1:185268936-185268937(-) m6A CDS//exon       26404942 chr1:185269154-185269155(-) m6A CDS//exon       22575960 chr1:185269197-185269198(-) m6A CDS//exon       22575960 chr1:185275709-185275710(-) m6A exon//intron       24981863 chr1:185275719-185275720(-) m6A exon//intron       24981863 chr1:185275728-185275729(-) m6A exon//intron       24981863 chr1:185275743-185275744(-) m6A exon//intron       24981863 chr1:185276169-185276170(-) Cm CDS//exon       - chr1:185280346-185280347(-) m6A 5'UTR//exon       24284625//24981863//26404942//27773535//22575960 chr1:185280402-185280403(-) m6A 5'UTR//exon       24284625//24981863//26404942//27773535//22575960 chr1:185286088-185286089(-) m6A 5'UTR//exon       24284625//24981863//26404942 chr1:185286227-185286228(-) m6A 5'UTR//exon       24284625//24981863//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	IVNS1ABP	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H11
Interactor2: IVNS1ABP

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg