Detail Information

Basic Information:


  VIRBase ID:  

VHID00107637

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-3p:           PHLDB3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H8-3p PHLDB3
miRBase
Accession/Entrez ID		 MIMAT0012598 653583
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PHLDB3
chr19:43996039(-) A-I      intronic
chr19:43996078(-) A-I      intronic
chr19:43981762(-) A-I      intronic
chr19:43981750(-) A-I      intronic
chr19:43981739(-) A-I      intronic
chr19:43995981(-) A-I      intronic
chr19:43997722(-) A-I      intronic
chr19:43996026(-) A-I      intronic
chr19:43981763(-) A-I      intronic
chr19:43981764(-) A-I      intronic
chr19:43981775(-) A-I      intronic
chr19:43995759(-) A-I      intronic
chr19:43980768(-) A-I      intronic
chr19:43995775(-) A-I      intronic
chr19:43995924(-) A-I      intronic
chr19:43995972(-) A-I      intronic
chr19:43987544(-) A-I      intronic
chr19:43995992(-) A-I      intronic
chr19:43996031(-) A-I      intronic
chr19:43989865(-) A-I      intronic
chr19:43989973(-) A-I      intronic
chr19:43992547(-) A-I      intronic
chr19:44004384(-) A-I      intronic
chr19:44004352(-) A-I      intronic
chr19:44004315(-) A-I      intronic
chr19:44004267(-) A-I      intronic
chr19:44004096(-) A-I      intronic
chr19:44003954(-) A-I      intronic
chr19:44003953(-) A-I      intronic
chr19:43998412(-) A-I      intronic
chr19:43998394(-) A-I      intronic
chr19:43992088(-) A-I      intronic
chr19:43993208(-) A-I      intronic
chr19:43993219(-) A-I      intronic
chr19:43994445(-) A-I      intronic
chr19:43994468(-) A-I      intronic
chr19:43992158(-) A-I      intronic
chr19:43992166(-) A-I      intronic
chr19:43992353(-) A-I      intronic
chr19:43992386(-) A-I      intronic
chr19:43992425(-) A-I      intronic
chr19:43992546(-) A-I      intronic
chr19:43998389(-) A-I      intronic
chr19:43998288(-) A-I      intronic
chr19:43998275(-) A-I      intronic
chr19:43998270(-) A-I      intronic
chr19:43998252(-) A-I      intronic
chr19:43997672(-) A-I      intronic
chr19:43997378(-) A-I      intronic
chr19:43997331(-) A-I      intronic
chr19:43989501(-) A-I      intronic
chr19:43997265(-) A-I      intronic
chr19:43997201(-) A-I      intronic
chr19:43997186(-) A-I      intronic
chr19:43996466(-) A-I      intronic
chr19:43996458(-) A-I      intronic
chr19:43996432(-) A-I      intronic
chr19:43996427(-) A-I      intronic
chr19:43996382(-) A-I      intronic
chr19:43996370(-) A-I      intronic
chr19:43996299(-) A-I      intronic
chr19:43996284(-) A-I      intronic
chr19:43994636(-) A-I      intronic
chr19:43994618(-) A-I      intronic
chr19:43994593(-) A-I      intronic
chr19:43994475(-) A-I      intronic
chr19:43988141(-) A-I      intronic
chr19:43988159(-) A-I      intronic
chr19:43988221(-) A-I      intronic
chr19:43988284(-) A-I      intronic
chr19:43988287(-) A-I      intronic
chr19:43988291(-) A-I      intronic
chr19:43981153(-) A-I      intronic
chr19:43980733(-) A-I      intronic
chr19:43980197(-) A-I      intronic
chr19:43980143(-) A-I      intronic
chr19:43980130(-) A-I      intronic
chr19:43992103(-) A-I      intronic
chr19:43992123(-) A-I      intronic
chr19:43980053(-) A-I      intronic
chr19:43988320(-) A-I      intronic
chr19:43988321(-) A-I      intronic
chr19:43988328(-) A-I      intronic
chr19:43988359(-) A-I      intronic
chr19:43992563(-) A-I      intronic
chr19:43992974(-) A-I      intronic
chr19:43993027(-) A-I      intronic
chr19:43993048(-) A-I      intronic
chr19:43993089(-) A-I      intronic
chr19:43988740(-) A-I      intronic
chr19:43988752(-) A-I      intronic
chr19:43988755(-) A-I      intronic
chr19:43988781(-) A-I      intronic
chr19:43993098(-) A-I      intronic
chr19:43993131(-) A-I      intronic
chr19:43993140(-) A-I      intronic
chr19:43993153(-) A-I      intronic
chr19:43988782(-) A-I      intronic
chr19:43988807(-) A-I      intronic
chr19:43989106(-) A-I      intronic
chr19:43989488(-) A-I      intronic
chr19:43989846(-) A-I      intronic
chr19:43993165(-) A-I      intronic
chr19:43980045(-) A-I      intronic
chr19:43980016(-) A-I      intronic
chr19:43980015(-) A-I      intronic
chr19:43986779(-) A-I      intronic
chr19:43993183(-) A-I      intronic
chr19:43993189(-) A-I      intronic
chr19:43981160(-) A-I      intronic
chr19:43982984(-) A-I      intronic
chr19:43984186(-) A-I      intronic
chr19:43984203(-) A-I      intronic
chr19:43984241(-) A-I      intronic
chr19:43986748(-) A-I      intronic
chr19:43986766(-) A-I      intronic
chr19:44004030(-) A-I      intronic
chr19:43998227(-) A-I      intronic
chr19:43992230(-) A-I      intronic
chr19:43993955(-) A-I      intronic
chr19:43994596(-) A-I      intronic
chr19:43997379(-) A-I      intronic
chr19:43980080(-) A-I      intronic
chr19:43994623(-) A-I      intronic
chr19:43997684(-) A-I      intronic
chr19:43980729(-) A-I      intronic
chr19:43980152(-) A-I      intronic
chr19:43997727(-) A-I      intronic
chr19:43995792(-) A-I      intronic
chr19:43993044(-) A-I      intronic
chr19:43980086(-) A-I      intronic
chr19:43996086(-) A-I      intronic
chr19:43996061(-) A-I      intronic
chr19:43996497(-) A-I      intronic
chr19:43998283(-) A-I      intronic
chr19:43997778(-) A-I      intronic
chr19:43994605(-) A-I      intronic
chr19:43994520(-) A-I      intronic
chr19:43992244(-) A-I      intronic
chr19:43981878(-) A-I      intronic
chr19:43995794(-) A-I      intronic
chr19:43985377(-) A-I      intronic
chr19:43992509(-) A-I      intronic
chr19:43994706(-) A-I      intronic
chr19:43995750(-) A-I      intronic
chr19:43980121(-) A-I      intronic
chr19:43986776(-) A-I      intronic
chr19:43994466(-) A-I      intronic
chr19:43992562(-) A-I      intronic
chr19:43985877(-) A-I      intronic
chr19:43995746(-) A-I      intronic
chr19:43985687(-) A-I      intronic
chr19:43988833(-) A-I      intronic
chr19:43993510(-) A-I      intronic
chr19:43997649(-) A-I      intronic
chr19:43988764(-) A-I      intronic
chr19:43997570(-) A-I      intronic
chr19:43992956(-) A-I      intronic
chr19:43995721(-) A-I      intronic
chr19:43980562(-) A-I      intronic
chr19:43988100(-) A-I      intronic
chr19:43985658(-) A-I      intronic
chr19:43996510(-) A-I      intronic
chr19:43988147(-) A-I      intronic
chr19:43980552(-) A-I      intronic
chr19:43986759(-) A-I      intronic
chr19:43998434(-) A-I      intronic
chr19:43985416(-) A-I      intronic
chr19:43985621(-) A-I      intronic
chr19:43995927(-) A-I      intronic
chr19:43987494(-) A-I      intronic
chr19:43988362(-) A-I      intronic
chr19:43995791(-) A-I      intronic
chr19:43989644(-) A-I      intronic
chr19:43997753(-) A-I      intronic
chr19:43998429(-) A-I      intronic
chr19:43997543(-) A-I      intronic
chr19:43992387(-) A-I      intronic
chr19:43994622(-) A-I      intronic
chr19:43998335(-) A-I      intronic
chr19:43994533(-) A-I      intronic
chr19:43997531(-) A-I      intronic
chr19:43988769(-) A-I      intronic
chr19:43992390(-) A-I      intronic
chr19:43992436(-) A-I      intronic
chr19:43987706(-) A-I      intronic
chr19:43995691(-) A-I      intronic
chr19:43997553(-) A-I      intronic
chr19:43988238(-) A-I      intronic
chr19:43998356(-) A-I      intronic
chr19:43996043(-) A-I      intronic
chr19:43994460(-) A-I      intronic
chr19:43980127(-) A-I      intronic
chr19:43987689(-) A-I      intronic
chr19:43984249(-) A-I      intronic
chr19:43981877(-) A-I      intronic
chr19:43987717(-) A-I      intronic
chr19:43991691(-) A-I      intronic
chr19:43998291(-) A-I      intronic
chr19:43994547(-) A-I      intronic
chr19:43997392(-) A-I      intronic
chr19:43997770(-) A-I      intronic
chr19:44007693(-) A-I      intronic
chr19:43994704(-) A-I      intronic
chr19:43981725(-) A-I      intronic
chr19:43981230(-) A-I      intronic
chr19:44004000(-) A-I      intronic
chr19:43990105(-) A-I      intronic
chr19:43997595(-) A-I      intronic
chr19:43980193(-) A-I      intronic
chr19:43992373(-) A-I      intronic
chr19:43986758(-) A-I      intronic
chr19:43994495(-) A-I      intronic
chr19:43996069(-) A-I      intronic
chr19:44003946(-) A-I      intronic
chr19:43995993(-) A-I      intronic
chr19:43980175(-) A-I      intronic
chr19:43992220(-) A-I      intronic
chr19:43993224(-) A-I      intronic
chr19:43995915(-) A-I      intronic
chr19:43996032(-) A-I      intronic
chr19:43993419(-) A-I      intronic
chr19:43993424(-) A-I      intronic
chr19:43996246(-) A-I      intronic
chr19:43996376(-) A-I      intronic
chr19:43994597(-) A-I      intronic
chr19:43995930(-) A-I      intronic
chr19:43994528(-) A-I      intronic
chr19:44004072(-) A-I      intronic
chr19:43994702(-) A-I      intronic
chr19:43994467(-) A-I      intronic
chr19:43985431(-) A-I      intronic
chr19:43994037(-) A-I      intronic
chr19:43992391(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PHLDB3
chr19:43993516(-) A-I intron -    21960545
chr19:43993517(-) A-I intron -    21960545
chr19:43994466(-) A-I intron -    21960545
chr19:43994467(-) A-I intron -    21960545
chr19:43994495(-) A-I intron -    21960545
chr19:43980562(-) A-G intron -    22484847
chr19:43988362(-) A-G intron -    22484847
chr19:43992373(-) A-G intron -    22484847
chr19:43994528(-) A-G intron -    22484847
chr19:43994583(-) A-G intron -    22484847
chr19:43994605(-) A-G intron -    22484847
chr19:43995746(-) A-G intron -    22484847
chr19:43995993(-) A-G intron -    22484847
chr19:43996246(-) A-G intron -    22484847
chr19:43998227(-) A-G intron -    22484847
chr19:44000306(-) A-G intron -    22484847
chr19:44000399(-) A-G intron -    22484847
chr19:44000404(-) A-G intron -    22484847
chr19:44000413(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PHLDB3
chr19:43979260-43979261(-) m6A 3'UTR//exon       -
chr19:43979307-43979308(-) m6A 3'UTR//exon       -
chr19:43979574-43979575(-) m6A CDS//exon       24284625
chr19:43979662-43979663(-) m6A CDS//exon       27773535
chr19:43982272-43982273(-) m6A CDS//exon       27773535
chr19:43990467-43990468(-) m6A CDS//exon//intron       27773536
chr19:43991253-43991254(-) m6A CDS//exon//intron       27773536
chr19:43998948-43998949(-) m6A CDS//exon       27371828//27773536
chr19:43999438-43999439(-) m6A CDS//exon       27371828//27773536
chr19:43999451-43999452(-) m6A CDS//exon       24284625//27371828//27773536
chr19:43999675-43999676(-) m1A CDS//exon       26863196
chr19:43999775-43999776(-) m6A exon//intron       27773535//27371828//27773536
chr19:44000194-44000195(-) m6A 3'UTR//intron       27773536
chr19:44001296-44001297(-) m6A CDS       27371828//27773536
chr19:44001312-44001313(-) m6A CDS       27371828//27773536
chr19:44001336-44001337(-) m6A CDS       24209618//27773535//27371828//27773536
chr19:44001390-44001391(-) m6A CDS       24284625//27773535//27371828//27773536
chr19:44001422-44001423(-) m6A CDS       24284625//24209618//27773535//27371828//27773536
chr19:44001933-44001934(-) m6A CDS       24284625//24209618//27773535//27371828//27773536
chr19:44001956-44001957(-) m6A CDS       24284625//24209618//27773535//27371828//27773536
chr19:44001974-44001975(-) m6A CDS       24284625//24209618//27371828//27773536
chr19:44002025-44002026(-) m6A CDS       24284625//24209618//27371828//27773536
chr19:44005775-44005776(-) m6A exon//intron       27773536
chr19:44005888-44005889(-) m6A CDS//exon       24209618//27773536
chr19:44006339-44006340(-) m6A CDS//exon       24209618//27371828//27773536
chr19:44008100-44008101(-) m1A CDS//exon       26863196
chr19:44008141-44008142(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536
chr19:44008168-44008169(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536
chr19:44008239-44008240(-) m6A CDS//exon       24284625//24981863//27371828//27773536
chr19:44008793-44008794(-) m6A 5'UTR//exon       24981863
chr19:44008810-44008811(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PHLDB3
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H8-3p
Interactor2: PHLDB3

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

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