Basic Information:

  VIRBase ID:  

VHID00106193

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:  MIMAT0012597          SAPCD1:  NM_001039651     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H8-5p	SAPCD1
miRBase Accession/Entrez ID	MIMAT0012597	401251
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C6orf26//NG23

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SAPCD1	chr6:31730608-31730609(+) m6A 5'UTR       24284625 chr6:31730632-31730633(+) m6A 5'UTR       24284625 chr6:31730648-31730649(+) m6A 5'UTR       24284625 chr6:31730690-31730691(+) m6A 5'UTR       24284625 chr6:31730705-31730706(+) m6A 5'UTR       24284625 chr6:31730778-31730779(+) m6A 5'UTR       24284625 chr6:31731279-31731280(+) m6A CDS       - chr6:31731398-31731399(+) m6A exon//intron       - chr6:31731410-31731411(+) m6A exon//intron       - chr6:31731609-31731610(+) m6A exon//intron       - chr6:31731671-31731672(+) m6A exon//intron       - chr6:31731904-31731905(+) m6A CDS//exon       - chr6:31732061-31732062(+) m6A CDS//exon//intron       24284625 chr6:31732115-31732116(+) m6A CDS//intron       24284625 chr6:31732136-31732137(+) m6A intron       24284625 chr6:31732308-31732309(+) m6A 3'UTR       24284625 chr6:31732424-31732425(+) m6A 3'UTR       24284625//27773535 chr6:31732460-31732461(+) m6A 3'UTR       24284625//27773535 chr6:31732560-31732561(+) m6A 3'UTR       27773535 chr6:31732591-31732592(+) m6A 3'UTR       27773535 chr6:31732597-31732598(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SAPCD1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H8-5p
Interactor2: SAPCD1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg