Basic Information:

  VIRBase ID:  

VHID00106145

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:  MIMAT0012597          AMIGO2:  NM_001143668     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H8-5p	AMIGO2
miRBase Accession/Entrez ID	MIMAT0012597	347902
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ALI1//AMIGO-2//DEGA

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AMIGO2	chr12:47470308-47470309(-) m6A 3'UTR       27773535 chr12:47470375-47470376(-) m6A 3'UTR       27773535 chr12:47470397-47470398(-) m6A 3'UTR       27773535 chr12:47470409-47470410(-) m6A 3'UTR       27773535 chr12:47470459-47470460(-) m6A 3'UTR       27773535 chr12:47470823-47470824(-) m6A 3'UTR       26404942 chr12:47470864-47470865(-) m6A 3'UTR       26404942 chr12:47470894-47470895(-) m6A 3'UTR       26404942 chr12:47471375-47471376(-) m6A CDS       24981863//26404942//27773535 chr12:47471495-47471496(-) m6A CDS       24209618//24981863//26404942//27773535//22608085 chr12:47471503-47471504(-) m6A CDS       24209618//24981863//26404942//27773535//22608085 chr12:47471662-47471663(-) m6A CDS       24209618//24981863//26404942//27773535//22608085 chr12:47471769-47471770(-) m6A CDS       24209618//25456834//24981863//26404942//27773535//22608085 chr12:47471798-47471799(-) m6A CDS       24209618//25456834//24981863//26404942//27773535//22608085 chr12:47471845-47471846(-) m6A CDS       24209618//25456834//24981863//26404942//27773535//22608085 chr12:47471870-47471871(-) m6A CDS       24209618//25456834//24981863//26404942//27773535//22608085 chr12:47472102-47472103(-) m6A CDS       24209618//24981863//26404942//27773535//22608085 chr12:47472131-47472132(-) m6A CDS       24209618//24981863//26404942//27773535//22608085 chr12:47472206-47472207(-) m6A CDS       24209618//24981863//26404942//27773535//22608085 chr12:47472278-47472279(-) m6A CDS       24209618//24981863//26404942//27773535//22608085 chr12:47472498-47472499(-) m6A CDS       24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr12:47472564-47472565(-) m6A CDS       24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr12:47472569-47472570(-) m6A CDS       24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr12:47472581-47472582(-) m6A CDS       24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr12:47472591-47472592(-) m6A CDS       24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr12:47472612-47472613(-) m6A CDS       24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr12:47472734-47472735(-) m6A CDS       24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr12:47472801-47472802(-) m6A 5'UTR       24209618//24981863//26404942//27773535//27371828 chr12:47472814-47472815(-) m6A 5'UTR       24209618//24981863//26404942//27773535//27371828 chr12:47472956-47472957(-) m6A 5'UTR//intron       24209618//24981863//26404942//27773535//27371828 chr12:47473301-47473302(-) m6A 5'UTR       24209618//25456834//24981863//26404942//27773535//27371828 chr12:47473317-47473318(-) m6A 5'UTR       24209618//25456834//24981863//26404942//27773535//27371828 chr12:47473323-47473324(-) m6A 5'UTR       24209618//25456834//24981863//26404942//27773535//27371828 chr12:47473407-47473408(-) m6A 5'UTR       24209618//25456834//24981863//27371828 chr12:47473486-47473487(-) m6A 5'UTR       24209618//24981863 chr12:47473652-47473653(-) m6A 5'UTR       24209618//24981863 chr12:47473693-47473694(-) m6A 5'UTR       24209618//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AMIGO2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H8-5p
Interactor2: AMIGO2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg