Basic Information:

  VIRBase ID:  

VHID00106101

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:  MIMAT0012597          TPRG1:  NM_198485     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H8-5p	TPRG1
miRBase Accession/Entrez ID	MIMAT0012597	285386
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FAM79B

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TPRG1	chr3:188962849(+) A-I      intronic chr3:188944959(+) A-I      intronic chr3:188945023(+) A-I      intronic chr3:189024861(+) A-I      intronic chr3:188942927(+) A-I      intronic chr3:188896213(+) A-I      intronic chr3:188896222(+) A-I      intronic chr3:188896224(+) A-I      intronic chr3:188917374(+) A-I      intronic chr3:188919497(+) A-I      intronic chr3:188942190(+) A-I      intronic chr3:188944947(+) A-I      intronic chr3:189032860(+) A-I      intronic chr3:189032919(+) A-I      intronic chr3:189032923(+) A-I      intronic chr3:188917379(+) A-I      intronic chr3:189032837(+) A-I      intronic chr3:188917392(+) A-I      intronic chr3:188945749(+) A-I      intronic chr3:188962809(+) A-I      intronic chr3:189032905(+) A-I      intronic chr3:188945018(+) A-I      intronic chr3:188944951(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TPRG1	chr3:188956698(+) A-T intron -    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TPRG1	chr3:188850405-188850406(+) m6A 5'UTR//exon       - chr3:188850441-188850442(+) m6A 5'UTR//exon       - chr3:188850466-188850467(+) m6A 5'UTR//exon       - chr3:188850482-188850483(+) m6A 5'UTR//exon       - chr3:189038512-189038513(+) m6A CDS       - chr3:189038528-189038529(+) m6A CDS       - chr3:189038559-189038560(+) m6A CDS       - chr3:189038569-189038570(+) m6A CDS       - chr3:189038688-189038689(+) m6A 3'UTR       - chr3:189038694-189038695(+) m6A 3'UTR       - chr3:189038768-189038769(+) m6A 3'UTR       - chr3:189038789-189038790(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TPRG1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H8-5p
Interactor2: TPRG1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg