Basic Information:

  VIRBase ID:  

VHID00105740

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:  MIMAT0012597          RERG:  NM_001190726     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H8-5p	RERG
miRBase Accession/Entrez ID	MIMAT0012597	85004
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RERG	chr12:15501503(-) A-I      ncRNA chr12:15311323(-) A-I      intronic chr12:15335836(-) A-I      intronic chr12:15335792(-) A-I      intronic chr12:15335791(-) A-I      intronic chr12:15311354(-) A-I      intronic chr12:15311324(-) A-I      intronic chr12:15302058(-) A-I      intronic chr12:15311308(-) A-I      intronic chr12:15367729(-) A-I      intronic chr12:15340675(-) A-I      intronic chr12:15300990(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RERG	chr12:15262179-15262180(-) m6A CDS       24209618//24981863//27773535//22575960//22608085 chr12:15262275-15262276(-) m6A CDS       24209618//25456834//24981863//27773535//22575960//22608085 chr12:15262290-15262291(-) m6A CDS       24209618//25456834//24981863//27773535//22575960//22608085 chr12:15262344-15262345(-) m6A CDS       24209618//25456834//24981863//27773535//22575960//22608085 chr12:15263943-15263944(-) m6A 3'UTR//intron       27773535 chr12:15290816-15290817(-) m6A CDS//intron       27773535 chr12:15370399-15370400(-) m6A CDS//exon       27773535 chr12:15370484-15370485(-) m6A 5'UTR//exon       27773535 chr12:15370490-15370491(-) m6A 5'UTR//exon       27773535 chr12:15370528-15370529(-) m6A 5'UTR//exon       27773535 chr12:15374161-15374162(-) m6A 5'UTR//exon//intron       27773536 chr12:15374172-15374173(-) m6A 5'UTR//exon//intron       27773536 chr12:15374183-15374184(-) m6A 5'UTR//exon//intron       27773536 chr12:15374308-15374309(-) m6A 5'UTR//intron       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RERG	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H8-5p
Interactor2: RERG

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg