Basic Information:

  VIRBase ID:  

VHID00105562

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:  MIMAT0012597          TMEM237:  NM_001044385     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H8-5p	TMEM237
miRBase Accession/Entrez ID	MIMAT0012597	65062
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ALS2CR4//JBTS14

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMEM237	chr2:202502460(-) A-I      intronic chr2:202505730(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TMEM237	chr2:202504693(-) G-A intron -    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM237	chr2:202485389-202485390(-) m6A 3'UTR//exon       27773535//22608085 chr2:202485448-202485449(-) m6A 3'UTR//exon       24981863//27773535//22608085 chr2:202485458-202485459(-) m6A 3'UTR//exon       24981863//27773535//22608085 chr2:202485472-202485473(-) m6A 3'UTR//exon       24981863//27773535//22608085 chr2:202488522-202488523(-) m6A 3'UTR//exon       27773535 chr2:202488618-202488619(-) m6A 3'UTR//exon       27773535 chr2:202496843-202496844(-) m6A 3'UTR//CDS//exon       24981863//26404942 chr2:202496854-202496855(-) m6A 3'UTR//CDS//exon       24981863//26404942 chr2:202496874-202496875(-) m6A 3'UTR//CDS//exon       24981863//26404942 chr2:202496926-202496927(-) m6A 3'UTR//CDS//exon       24981863//27773535 chr2:202498037-202498038(-) m6A 3'UTR//CDS//exon       24981863//27773535 chr2:202498050-202498051(-) m6A 3'UTR//CDS//exon       24981863//27773535 chr2:202498145-202498146(-) m6A 3'UTR//CDS//exon       27773535 chr2:202503719-202503720(-) m6A CDS//exon       24981863//27773535 chr2:202503726-202503727(-) m6A CDS//exon       24981863//27773535 chr2:202508116-202508117(-) m6A 5'UTR//CDS//exon       27773536 chr2:202508260-202508261(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM237	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H8-5p
Interactor2: TMEM237

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg