Detail Information

Basic Information:


  VIRBase ID:  

VHID00105432

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:           C2orf83:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H8-5p C2orf83
miRBase
Accession/Entrez ID
MIMAT0012597 56918
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR C2orf83
chr2:228483209(-) A-I      intronic
chr2:228483191(-) A-I      intronic
chr2:228483093(-) A-I      intronic
chr2:228483735(-) A-I      intronic
chr2:228483732(-) A-I      intronic
chr2:228485744(-) A-I      intronic
chr2:228483826(-) A-I      intronic
chr2:228483828(-) A-I      intronic
chr2:228483287(-) A-I      intronic
chr2:228483183(-) A-I      intronic
chr2:228483721(-) A-I      intronic
chr2:228483219(-) A-I      intronic
chr2:228483165(-) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate C2orf83
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H8-5p
Interactor2: C2orf83

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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