Basic Information:

  VIRBase ID:  

VHID00105137

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:  MIMAT0012597          FBXO25:  NM_183420     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H8-5p	FBXO25
miRBase Accession/Entrez ID	MIMAT0012597	26260
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FBX25

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FBXO25	chr8:369176(+) A-I      intronic chr8:368592(+) A-I      intronic chr8:368574(+) A-I      intronic chr8:368457(+) A-I      intronic chr8:368443(+) A-I      intronic chr8:369266(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FBXO25	chr8:357043-357044(+) m6A 5'UTR//intron       24981863 chr8:363076-363077(+) m6A 5'UTR       24981863 chr8:363098-363099(+) m6A 5'UTR//CDS       24981863 chr8:418890-418891(+) m6A 3'UTR//intron       25456834//24981863//22608085 chr8:418929-418930(+) m6A 3'UTR//intron       25456834//24981863//22608085 chr8:418951-418952(+) m6A 3'UTR//intron       25456834//24981863//22608085 chr8:419017-419018(+) m6A 3'UTR//intron       24981863//22608085 chr8:420943-420944(+) m6A 3'UTR       27773535 chr8:426745-426746(+) m6A 3'UTR       27773535 chr8:427380-427381(+) m6A 3'UTR       27773535 chr8:427477-427478(+) m6A 3'UTR       27773535 chr8:427564-427565(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FBXO25	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus HCC cell line (HepG2)     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H8-5p
Interactor2: FBXO25

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg