Basic Information:

  VIRBase ID:  

VHID00104712

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:  MIMAT0012597          BCL10:  NM_001320715     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H8-5p	BCL10
miRBase Accession/Entrez ID	MIMAT0012597	8915
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	c-E10//CARMEN//CIPER//CLAP//IMD37//mE10

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BCL10	chr1:85736203(-) A-I      intronic chr1:85736054(-) A-I      intronic chr1:85736058(-) A-I      intronic chr1:85736080(-) A-I      intronic chr1:85736084(-) A-I      intronic chr1:85736184(-) A-I      intronic chr1:85736088(-) A-I      intronic chr1:85736100(-) A-I      intronic chr1:85735994(-) A-I      intronic chr1:85736120(-) A-I      intronic chr1:85736155(-) A-I      intronic chr1:85736216(-) A-I      intronic chr1:85736112(-) A-I      intronic chr1:85732276(-) A-I      3'UTR chr1:85734368(-) A-I      intronic chr1:85735964(-) A-I      intronic chr1:85732432(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BCL10	chr1:85734368(-) A-G intron -    22484847 chr1:85735964(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BCL10	chr1:85733361-85733362(-) m6A 3'UTR//CDS       24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085 chr1:85733371-85733372(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr1:85733421-85733422(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr1:85733429-85733430(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr1:85733467-85733468(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr1:85733573-85733574(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr1:85733619-85733620(-) m6A CDS       24981863//27773535//27371828//22608085 chr1:85733642-85733643(-) m6A CDS//intron       24981863//27773535//27371828//22608085 chr1:85736310-85736311(-) m6A CDS       24981863//27773535//27371828//22608085 chr1:85736316-85736317(-) m6A CDS       24981863//27773535//27371828//22608085 chr1:85736331-85736332(-) m6A CDS       24981863//27773535//27371828//22608085 chr1:85736368-85736369(-) m6A CDS       24981863//27773535//27371828//22608085 chr1:85736375-85736376(-) m6A CDS       24981863//27773535//27371828//22608085 chr1:85736407-85736408(-) m6A CDS       24981863//27773535//27371828//22608085 chr1:85736422-85736423(-) m6A CDS       24981863//27773535//27371828//22608085 chr1:85736437-85736438(-) m6A CDS       24981863//26404942//27773535//27371828//22608085 chr1:85736471-85736472(-) m6A CDS       24981863//26404942//27773535//27371828//22608085 chr1:85736494-85736495(-) m6A CDS       24981863//27773535//27371828//22608085 chr1:85736538-85736539(-) m6A CDS       24981863//27773535//22608085 chr1:85742000-85742001(-) m6A CDS       24981863//27773535//22608085 chr1:85742057-85742058(-) m1A 5'UTR       26863196//26863410 chr1:85742066-85742067(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BCL10	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H8-5p
Interactor2: BCL10

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg