Basic Information:

  VIRBase ID:  

VHID00104320

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:  MIMAT0012597          IL10RB:  NM_000628     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H8-5p	IL10RB
miRBase Accession/Entrez ID	MIMAT0012597	3588
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CDW210B//CRF2-4//CRFB4//D21S58//D21S66//IL-10R2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IL10RB	chr21:34665965(+) A-I      intronic chr21:34643844(+) A-I      intronic chr21:34643856(+) A-I      intronic chr21:34669033(+) A-I      3'UTR chr21:34669213(+) A-I      3'UTR chr21:34669174(+) A-I      3'UTR chr21:34669130(+) A-I      3'UTR chr21:34669204(+) A-I      3'UTR chr21:34669200(+) A-I      3'UTR chr21:34669173(+) A-I      3'UTR chr21:34668999(+) A-I      3'UTR chr21:34668998(+) A-I      3'UTR chr21:34665991(+) A-I      intronic chr21:34665925(+) A-I      intronic chr21:34659704(+) A-I      intronic chr21:34659692(+) A-I      intronic chr21:34657356(+) A-I      intronic chr21:34643863(+) A-I      intronic chr21:34643858(+) A-I      intronic chr21:34669052(+) A-I      3'UTR chr21:34669159(+) A-I      3'UTR chr21:34669051(+) A-I      3'UTR chr21:34669147(+) A-I      3'UTR chr21:34643838(+) A-I      intronic chr21:34654912(+) A-I      intronic chr21:34657470(+) A-I      intronic chr21:34657405(+) A-I      intronic chr21:34657360(+) A-I      intronic chr21:34657296(+) A-I      intronic chr21:34656576(+) A-I      intronic chr21:34654831(+) A-I      intronic chr21:34654761(+) A-I      intronic chr21:34654707(+) A-I      intronic chr21:34654637(+) A-I      intronic chr21:34654597(+) A-I      intronic chr21:34667830(+) A-I      intronic chr21:34667748(+) A-I      intronic chr21:34667715(+) A-I      intronic chr21:34667703(+) A-I      intronic chr21:34665930(+) A-I      intronic chr21:34665906(+) A-I      intronic chr21:34642038(+) A-I      intronic chr21:34663847(+) A-I      intronic chr21:34642103(+) A-I      intronic chr21:34642815(+) A-I      intronic chr21:34642825(+) A-I      intronic chr21:34662325(+) A-I      intronic chr21:34663833(+) A-I      intronic chr21:34659722(+) A-I      intronic chr21:34659145(+) A-I      intronic chr21:34659067(+) A-I      intronic chr21:34656439(+) A-I      intronic chr21:34656422(+) A-I      intronic chr21:34655029(+) A-I      intronic chr21:34662304(+) A-I      intronic chr21:34662276(+) A-I      intronic chr21:34662265(+) A-I      intronic chr21:34662242(+) A-I      intronic chr21:34662232(+) A-I      intronic chr21:34662217(+) A-I      intronic chr21:34662144(+) A-I      intronic chr21:34663754(+) A-I      intronic chr21:34654017(+) A-I      intronic chr21:34654014(+) A-I      intronic chr21:34654005(+) A-I      intronic chr21:34644891(+) A-I      intronic chr21:34643983(+) A-I      intronic chr21:34643965(+) A-I      intronic chr21:34659907(+) A-I      intronic chr21:34659750(+) A-I      intronic chr21:34659741(+) A-I      intronic chr21:34643954(+) A-I      intronic chr21:34643948(+) A-I      intronic chr21:34643945(+) A-I      intronic chr21:34643886(+) A-I      intronic chr21:34643878(+) A-I      intronic chr21:34663805(+) A-I      intronic chr21:34643848(+) A-I      intronic chr21:34643847(+) A-I      intronic chr21:34643770(+) A-I      intronic chr21:34663806(+) A-I      intronic chr21:34663688(+) A-I      intronic chr21:34644986(+) A-I      intronic chr21:34663645(+) A-I      intronic chr21:34640073(+) A-I      intronic chr21:34655031(+) A-I      intronic chr21:34642162(+) A-I      intronic chr21:34654753(+) A-I      intronic chr21:34655075(+) A-I      intronic chr21:34663632(+) A-I      intronic chr21:34654983(+) A-I      intronic chr21:34663832(+) A-I      intronic chr21:34659821(+) A-I      intronic chr21:34667722(+) A-I      intronic chr21:34642237(+) A-I      intronic chr21:34665864(+) A-I      intronic chr21:34650014(+) A-I      intronic chr21:34657431(+) A-I      intronic chr21:34645027(+) A-I      intronic chr21:34656577(+) A-I      intronic chr21:34665868(+) A-I      intronic chr21:34640111(+) A-I      intronic chr21:34657313(+) A-I      intronic chr21:34659860(+) A-I      intronic chr21:34657244(+) A-I      intronic chr21:34643160(+) A-I      intronic chr21:34657439(+) A-I      intronic chr21:34654836(+) A-I      intronic chr21:34663671(+) A-I      intronic chr21:34643978(+) A-I      intronic chr21:34656480(+) A-I      intronic chr21:34669132(+) A-I      3'UTR chr21:34669012(+) A-I      3'UTR chr21:34669024(+) A-I      3'UTR chr21:34650295(+) A-I      intronic chr21:34643779(+) A-I      intronic chr21:34657300(+) A-I      intronic chr21:34654743(+) A-I      intronic chr21:34663651(+) A-I      intronic chr21:34644949(+) A-I      intronic chr21:34643926(+) A-I      intronic chr21:34654720(+) A-I      intronic chr21:34654910(+) A-I      intronic chr21:34665919(+) A-I      intronic chr21:34650401(+) A-I      intronic chr21:34666033(+) A-I      intronic chr21:34654013(+) A-I      intronic chr21:34658927(+) A-I      intronic chr21:34650290(+) A-I      intronic chr21:34643778(+) A-I      intronic chr21:34665893(+) A-I      intronic chr21:34643958(+) A-I      intronic chr21:34656425(+) A-I      intronic chr21:34657443(+) A-I      intronic chr21:34644826(+) A-I      intronic chr21:34643869(+) A-I      intronic chr21:34656440(+) A-I      intronic chr21:34663845(+) A-I      intronic chr21:34663602(+) A-I      intronic chr21:34656481(+) A-I      intronic chr21:34653939(+) A-I      intronic chr21:34644168(+) A-I      intronic chr21:34657375(+) A-I      intronic chr21:34657448(+) A-I      intronic chr21:34642170(+) A-I      intronic chr21:34643154(+) A-I      intronic chr21:34644987(+) A-I      intronic chr21:34662203(+) A-I      intronic chr21:34644187(+) A-I      intronic chr21:34662163(+) A-I      intronic chr21:34663635(+) A-I      intronic chr21:34663710(+) A-I      intronic chr21:34643912(+) A-I      intronic chr21:34666102(+) A-I      intronic chr21:34656513(+) A-I      intronic chr21:34659004(+) A-I      intronic chr21:34644972(+) A-I      intronic chr21:34653988(+) A-I      intronic chr21:34644173(+) A-I      intronic chr21:34666032(+) A-I      intronic chr21:34643977(+) A-I      intronic chr21:34650075(+) A-I      intronic chr21:34663760(+) A-I      intronic chr21:34667516(+) A-I      intronic chr21:34666021(+) A-I      intronic chr21:34642139(+) A-I      intronic chr21:34644961(+) A-I      intronic chr21:34659757(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	IL10RB	chr21:34643855(+) A-G intron -    22484847 chr21:34644168(+) A-G intron -    22484847 chr21:34644187(+) A-G intron -    22484847 chr21:34656440(+) A-G intron -    22484847 chr21:34656481(+) A-G intron -    22484847 chr21:34656510(+) A-G intron -    22484847 chr21:34656513(+) A-G intron -    22484847 chr21:34657335(+) A-G intron -    22484847 chr21:34663602(+) A-G intron -    22484847 chr21:34663710(+) A-G intron -    22484847 chr21:34669278(+) A-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IL10RB	chr21:34638701-34638702(+) m6A 5'UTR       24981863 chr21:34638753-34638754(+) m6A 5'UTR       - chr21:34668585-34668586(+) m6A 3'UTR//CDS//exon       - chr21:34668632-34668633(+) m6A 3'UTR//CDS//exon       - chr21:34668676-34668677(+) m6A 3'UTR//exon       24981863//22608085 chr21:34668744-34668745(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr21:34668756-34668757(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr21:34668783-34668784(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr21:34668791-34668792(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr21:34668798-34668799(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr21:34668858-34668859(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr21:34669173-34669174(+) m6A 3'UTR//exon       24981863 chr21:34669248-34669249(+) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr21:34669287-34669288(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr21:34669365-34669366(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr21:34669425-34669426(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	IL10RB	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H8-5p
Interactor2: IL10RB

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg