Detail Information

Basic Information:


  VIRBase ID:  

VHID00104100

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:           AUH:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H8-5p AUH
miRBase
Accession/Entrez ID		 MIMAT0012597 549
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR AUH
chr9:94054738(-) A-I      intronic
chr9:94054693(-) A-I      intronic
chr9:94054657(-) A-I      intronic
chr9:94100906(-) A-I      intronic
chr9:94107929(-) A-I      intronic
chr9:94039350(-) A-I      intronic
chr9:94054739(-) A-I      intronic
chr9:94038693(-) A-I      intronic
chr9:94108676(-) A-I      intronic
chr9:94108733(-) A-I      intronic
chr9:94108739(-) A-I      intronic
chr9:94109256(-) A-I      intronic
chr9:94109262(-) A-I      intronic
chr9:94054628(-) A-I      intronic
chr9:94054605(-) A-I      intronic
chr9:94054593(-) A-I      intronic
chr9:94054587(-) A-I      intronic
chr9:94054571(-) A-I      intronic
chr9:94054570(-) A-I      intronic
chr9:94054563(-) A-I      intronic
chr9:94030886(-) A-I      intronic
chr9:94030883(-) A-I      intronic
chr9:94034245(-) A-I      intronic
chr9:94098829(-) A-I      intronic
chr9:94098866(-) A-I      intronic
chr9:94100841(-) A-I      intronic
chr9:94115497(-) A-I      intronic
chr9:94034098(-) A-I      intronic
chr9:94117756(-) A-I      intronic
chr9:94054754(-) A-I      intronic
chr9:94030770(-) A-I      intronic
chr9:94031330(-) A-I      intronic
chr9:94116008(-) A-I      intronic
chr9:94116059(-) A-I      intronic
chr9:94121816(-) A-I      intronic
chr9:94031451(-) A-I      intronic
chr9:94031481(-) A-I      intronic
chr9:94031507(-) A-I      intronic
chr9:94100916(-) A-I      intronic
chr9:94100901(-) A-I      intronic
chr9:94107951(-) A-I      intronic
chr9:94108052(-) A-I      intronic
chr9:94108093(-) A-I      intronic
chr9:94112858(-) A-I      intronic
chr9:94112929(-) A-I      intronic
chr9:94112941(-) A-I      intronic
chr9:93994579(-) A-I      intronic
chr9:94098913(-) A-I      intronic
chr9:94098790(-) A-I      intronic
chr9:94098763(-) A-I      intronic
chr9:94098740(-) A-I      intronic
chr9:94054736(-) A-I      intronic
chr9:94054695(-) A-I      intronic
chr9:94054682(-) A-I      intronic
chr9:94113263(-) A-I      intronic
chr9:94113419(-) A-I      intronic
chr9:94113449(-) A-I      intronic
chr9:94077295(-) A-I      intronic
chr9:94076266(-) A-I      intronic
chr9:94076230(-) A-I      intronic
chr9:94113456(-) A-I      intronic
chr9:94113469(-) A-I      intronic
chr9:94113472(-) A-I      intronic
chr9:94113495(-) A-I      intronic
chr9:94054653(-) A-I      intronic
chr9:94113499(-) A-I      intronic
chr9:94113520(-) A-I      intronic
chr9:94114374(-) A-I      intronic
chr9:94114423(-) A-I      intronic
chr9:94114457(-) A-I      intronic
chr9:94115458(-) A-I      intronic
chr9:94115506(-) A-I      intronic
chr9:94071355(-) A-I      intronic
chr9:94115571(-) A-I      intronic
chr9:94115597(-) A-I      intronic
chr9:94054621(-) A-I      intronic
chr9:94052506(-) A-I      intronic
chr9:94052481(-) A-I      intronic
chr9:94115639(-) A-I      intronic
chr9:94115965(-) A-I      intronic
chr9:94115998(-) A-I      intronic
chr9:94071347(-) A-I      intronic
chr9:94070605(-) A-I      intronic
chr9:94070591(-) A-I      intronic
chr9:94056638(-) A-I      intronic
chr9:94054798(-) A-I      intronic
chr9:94054788(-) A-I      intronic
chr9:94031490(-) A-I      intronic
chr9:94054774(-) A-I      intronic
chr9:94054756(-) A-I      intronic
chr9:93994603(-) A-I      intronic
chr9:94031347(-) A-I      intronic
chr9:94085742(-) A-I      intronic
chr9:94076270(-) A-I      intronic
chr9:94070561(-) A-I      intronic
chr9:94030905(-) A-I      intronic
chr9:94070527(-) A-I      intronic
chr9:94116350(-) A-I      intronic
chr9:94030851(-) A-I      intronic
chr9:94077424(-) A-I      intronic
chr9:94052666(-) A-I      intronic
chr9:94112897(-) A-I      intronic
chr9:94113376(-) A-I      intronic
chr9:94056588(-) A-I      intronic
chr9:94113534(-) A-I      intronic
chr9:94076530(-) A-I      intronic
chr9:94031445(-) A-I      intronic
chr9:94070610(-) A-I      intronic
chr9:94054572(-) A-I      intronic
chr9:94076624(-) A-I      intronic
chr9:94117717(-) A-I      intronic
chr9:94030985(-) A-I      intronic
chr9:94030824(-) A-I      intronic
chr9:94076653(-) A-I      intronic
chr9:94071188(-) A-I      intronic
chr9:94052577(-) A-I      intronic
chr9:94054842(-) A-I      intronic
chr9:94054564(-) A-I      intronic
chr9:94034127(-) A-I      intronic
chr9:94116292(-) A-I      intronic
chr9:94076569(-) A-I      intronic
chr9:94052477(-) A-I      intronic
chr9:94054721(-) A-I      intronic
chr9:94113448(-) A-I      intronic
chr9:94034236(-) A-I      intronic
chr9:94054725(-) A-I      intronic
chr9:94054737(-) A-I      intronic
chr9:94064715(-) A-I      intronic
chr9:94031360(-) A-I      intronic
chr9:94115935(-) A-I      intronic
chr9:94113390(-) A-I      intronic
chr9:94030984(-) A-I      intronic
chr9:94011322(-) A-I      intronic
chr9:94030979(-) A-I      intronic
chr9:94034231(-) A-I      intronic
chr9:94030760(-) A-I      intronic
chr9:94054637(-) A-I      intronic
chr9:94098694(-) A-I      intronic
chr9:94039282(-) A-I      intronic
chr9:94100850(-) A-I      intronic
chr9:94098724(-) A-I      intronic
chr9:94112861(-) A-I      intronic
chr9:94117595(-) A-I      intronic
chr9:94030900(-) A-I      intronic
chr9:94115602(-) A-I      intronic
chr9:94098796(-) A-I      intronic
chr9:94054755(-) A-I      intronic
chr9:94054559(-) A-I      intronic
chr9:94113373(-) A-I      intronic
chr9:94034142(-) A-I      intronic
chr9:94014279(-) A-I      intronic
chr9:94070559(-) A-I      intronic
chr9:93987559(-) A-I      intronic
chr9:94030841(-) A-I      intronic
chr9:94071194(-) A-I      intronic
chr9:94115404(-) A-I      intronic
chr9:94115563(-) A-I      intronic
chr9:94054689(-) A-I      intronic
chr9:94039232(-) A-I      intronic
chr9:94100883(-) A-I      intronic
chr9:94031359(-) A-I      intronic
chr9:94054740(-) A-I      intronic
chr9:94112917(-) A-I      intronic
chr9:94030877(-) A-I      intronic
chr9:94098849(-) A-I      intronic
chr9:94113416(-) A-I      intronic
chr9:94116338(-) A-I      intronic
chr9:94077463(-) A-I      intronic
chr9:94014387(-) A-I      intronic
chr9:94076570(-) A-I      intronic
chr9:94113526(-) A-I      intronic
chr9:94112849(-) A-I      intronic
chr9:94034100(-) A-I      intronic
chr9:94052480(-) A-I      intronic
chr9:94034182(-) A-I      intronic
chr9:94054698(-) A-I      intronic
chr9:94115520(-) A-I      intronic
chr9:94100940(-) A-I      intronic
chr9:94054743(-) A-I      intronic
chr9:94034134(-) A-I      intronic
chr9:94098749(-) A-I      intronic
chr9:94030891(-) A-I      intronic
chr9:94113532(-) A-I      intronic
chr9:94031534(-) A-I      intronic
chr9:94113380(-) A-I      intronic
chr9:94056596(-) A-I      intronic
chr9:94052691(-) A-I      intronic
chr9:94054734(-) A-I      intronic
chr9:94064759(-) A-I      intronic
chr9:94077288(-) A-I      intronic
chr9:94031427(-) A-I      intronic
chr9:94115932(-) A-I      intronic
chr9:94039249(-) A-I      intronic
chr9:94054591(-) A-I      intronic
chr9:94034133(-) A-I      intronic
chr9:94113358(-) A-I      intronic
chr9:94115452(-) A-I      intronic
chr9:94054672(-) A-I      intronic
chr9:94054699(-) A-I      intronic
chr9:94100895(-) A-I      intronic
chr9:94098709(-) A-I      intronic
chr9:94056647(-) A-I      intronic
chr9:94011484(-) A-I      intronic
chr9:94052587(-) A-I      intronic
chr9:94056664(-) A-I      intronic
chr9:94115454(-) A-I      intronic
chr9:94054191(-) A-I      intronic
chr9:94014431(-) A-I      intronic
chr9:94054633(-) A-I      intronic
chr9:94115493(-) A-I      intronic
chr9:94065751(-) A-I      intronic
chr9:94056587(-) A-I      intronic
chr9:94030864(-) A-I      intronic
chr9:94052551(-) A-I      intronic
chr9:94054764(-) A-I      intronic
chr9:94115569(-) A-I      intronic
chr9:94052604(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED AUH
chr9:94030760(-) A-I intron -    15258596
chr9:94030851(-) A-I intron -    15258596
chr9:94030864(-) A-I intron -    15258596
chr9:94030905(-) A-I intron -    15258596
chr9:94030906(-) A-I intron -    15258596
chr9:94054689(-) A-I intron -    22327324
chr9:94054637(-) A-I intron -    21960545
chr9:94054642(-) A-I intron -    21960545
chr9:94054643(-) A-I intron -    21960545
chr9:94108580(-) A-G intron -    22484847
chr9:94030864(-) A-G intron -    22484847
chr9:94054564(-) A-G intron -    22484847
chr9:94054572(-) A-G intron -    22484847
chr9:94054643(-) A-G intron -    22484847
chr9:94054689(-) A-G intron -    22484847
chr9:94054698(-) A-G intron -    22484847
chr9:94054699(-) A-G intron -    22484847
chr9:94054725(-) A-G intron -    22484847
chr9:94054732(-) A-G intron -    22484847
chr9:94054734(-) A-G intron -    22484847
chr9:94054740(-) A-G intron -    22484847
chr9:94054743(-) A-G intron -    22484847
chr9:94054833(-) A-G intron -    22484847
chr9:94054834(-) A-G intron -    22484847
chr9:94056597(-) A-G intron -    22484847
chr9:94056664(-) A-G intron -    22484847
chr9:94056686(-) A-G intron -    22484847
chr9:94056708(-) A-G intron -    22484847
chr9:94056718(-) A-G intron -    22484847
chr9:94056747(-) A-G intron -    22484847
chr9:94056748(-) A-G intron -    22484847
chr9:94056792(-) A-G intron -    22484847
chr9:94094592(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase AUH
chr9:93976104-93976105(-) m6A 3'UTR       27773535
chr9:93976138-93976139(-) m6A 3'UTR       27773535
chr9:93976170-93976171(-) m6A 3'UTR       27773535
chr9:93976194-93976195(-) m6A 3'UTR       27773535
chr9:93976481-93976482(-) m6A 3'UTR//exon       24981863
chr9:93976541-93976542(-) m6A 3'UTR//exon       24284625//24981863
chr9:93976623-93976624(-) m6A 3'UTR//exon       24284625
chr9:93976686-93976687(-) m6A CDS//exon       24284625
chr9:93976690-93976691(-) m6A CDS//exon       24284625
chr9:93979606-93979607(-) m6A CDS//exon       27773535
chr9:93983111-93983112(-) m6A CDS//exon       27773535
chr9:93983147-93983148(-) m6A CDS//exon       27773535
chr9:93983152-93983153(-) m6A CDS//exon       27773535
chr9:93983268-93983269(-) m6A CDS       27773535
chr9:94056710-94056711(-) m6A intron       27773535
chr9:94118206-94118207(-) m6A CDS//exon       27773535
chr9:94118415-94118416(-) m6A CDS//exon       27773535
chr9:94122603-94122604(-) m6A exon//intron       24981863
chr9:94122683-94122684(-) m6A exon//intron       27371828
chr9:94122709-94122710(-) m6A exon//intron       27371828
chr9:94122715-94122716(-) m6A exon//intron       27371828//27773536
chr9:94123914-94123915(-) m6A CDS//exon       27371828//27773536
chr9:94123957-94123958(-) Am CDS//exon       -
chr9:94124179-94124180(-) m6A 5'UTR       24981863//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate AUH
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H8-5p
Interactor2: AUH

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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