Basic Information:

  VIRBase ID:  

VHID00104096

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:  MIMAT0012597          ATP1B2:  NM_001303263     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H8-5p	ATP1B2
miRBase Accession/Entrez ID	MIMAT0012597	482
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AMOG

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ATP1B2	chr17:7560039(+) A-I      3'UTR chr17:7560114(+) A-I      3'UTR chr17:7560261(+) A-I      3'UTR chr17:7560104(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ATP1B2	chr17:7560684-7560685(+) m6A 3'UTR       24981863 chr17:7560707-7560708(+) m6A 3'UTR       24981863 chr17:7560713-7560714(+) m6A 3'UTR       24981863 chr17:7560719-7560720(+) m6A 3'UTR       24981863 chr17:7560727-7560728(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ATP1B2	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H8-5p
Interactor2: ATP1B2

Evidence Support:

Prediction-Evidence	cRep//RNAHybrid
Support Database	RepTar//VmiReg