Basic Information:

  VIRBase ID:  

VHID00104064

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:  MIMAT0012597          ACLY:  NM_001303274     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H8-5p	ACLY
miRBase Accession/Entrez ID	MIMAT0012597	47
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ACL//ATPCL//CLATP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ACLY	chr17:40058723(-) A-I      intronic chr17:40058675(-) A-I      intronic chr17:40031021(-) A-I      intronic chr17:40058605(-) A-I      intronic chr17:40031001(-) A-I      intronic chr17:40058661(-) A-I      intronic chr17:40041057(-) A-I      intronic chr17:40031031(-) A-I      intronic chr17:40058552(-) A-I      intronic chr17:40073327(-) A-I      intronic chr17:40031527(-) A-I      intronic chr17:40060287(-) A-I      intronic chr17:40036913(-) A-I      intronic chr17:40059256(-) A-I      intronic chr17:40060238(-) A-I      intronic chr17:40030887(-) A-I      intronic chr17:40030965(-) A-I      intronic chr17:40030975(-) A-I      intronic chr17:40031010(-) A-I      intronic chr17:40036044(-) A-I      intronic chr17:40037503(-) A-I      intronic chr17:40037624(-) A-I      intronic chr17:40037629(-) A-I      intronic chr17:40040998(-) A-I      intronic chr17:40060310(-) A-I      intronic chr17:40060246(-) A-I      intronic chr17:40058637(-) A-I      intronic chr17:40073307(-) A-I      intronic chr17:40058582(-) A-I      intronic chr17:40058502(-) A-I      intronic chr17:40048175(-) A-I      intronic chr17:40047562(-) A-I      intronic chr17:40047481(-) A-I      intronic chr17:40047385(-) A-I      intronic chr17:40046121(-) A-I      intronic chr17:40046118(-) A-I      intronic chr17:40046117(-) A-I      intronic chr17:40046083(-) A-I      intronic chr17:40046077(-) A-I      intronic chr17:40046049(-) A-I      intronic chr17:40045155(-) A-I      intronic chr17:40045115(-) A-I      intronic chr17:40059288(-) A-I      intronic chr17:40058640(-) A-I      intronic chr17:40058739(-) A-I      intronic chr17:40041028(-) A-I      intronic chr17:40058631(-) A-I      intronic chr17:40059224(-) A-I      intronic chr17:40041298(-) A-I      intronic chr17:40031007(-) A-I      intronic chr17:40036861(-) A-I      intronic chr17:40045153(-) A-I      intronic chr17:40060199(-) A-I      intronic chr17:40057375(-) A-I      intronic chr17:40031491(-) A-I      intronic chr17:40041292(-) A-I      intronic chr17:40030689(-) A-I      intronic chr17:40030617(-) A-I      intronic chr17:40041291(-) A-I      intronic chr17:40031345(-) A-I      intronic chr17:40031471(-) A-I      intronic chr17:40036040(-) A-I      intronic chr17:40031099(-) A-I      intronic chr17:40031006(-) A-I      intronic chr17:40031490(-) A-I      intronic chr17:40045161(-) A-I      intronic chr17:40045295(-) A-I      intronic chr17:40031098(-) A-I      intronic chr17:40073153(-) A-I      intronic chr17:40031479(-) A-I      intronic chr17:40057372(-) A-I      intronic chr17:40030955(-) A-I      intronic chr17:40038365(-) A-I      intronic chr17:40059818(-) A-I      intronic chr17:40037589(-) A-I      intronic chr17:40031419(-) A-I      intronic chr17:40058645(-) A-I      intronic chr17:40030752(-) A-I      intronic chr17:40072729(-) A-I      intronic chr17:40058564(-) A-I      intronic chr17:40030932(-) A-I      intronic chr17:40030974(-) A-I      intronic chr17:40047509(-) A-I      intronic chr17:40059241(-) A-I      intronic chr17:40031440(-) A-I      intronic chr17:40073278(-) A-I      intronic chr17:40056895(-) A-I      intronic chr17:40041177(-) A-I      intronic chr17:40041014(-) A-I      intronic chr17:40060222(-) A-I      intronic chr17:40047441(-) A-I      intronic chr17:40031439(-) A-I      intronic chr17:40059240(-) A-I      intronic chr17:40038437(-) A-I      intronic chr17:40031357(-) A-I      intronic chr17:40031516(-) A-I      intronic chr17:40058615(-) A-I      intronic chr17:40068009(-) A-I      intronic chr17:40041297(-) A-I      intronic chr17:40040005(-) A-I      intronic chr17:40058646(-) A-I      intronic chr17:40031520(-) A-I      intronic chr17:40072791(-) A-I      intronic chr17:40031481(-) A-I      intronic chr17:40060337(-) A-I      intronic chr17:40047190(-) A-I      intronic chr17:40040975(-) A-I      intronic chr17:40033668(-) A-I      intronic chr17:40060288(-) A-I      intronic chr17:40036928(-) A-I      intronic chr17:40060331(-) A-I      intronic chr17:40037593(-) A-I      intronic chr17:40058644(-) A-I      intronic chr17:40047404(-) A-I      intronic chr17:40047386(-) A-I      intronic chr17:40041427(-) A-I      intronic chr17:40035632(-) A-I      intronic chr17:40059314(-) A-I      intronic chr17:40059300(-) A-I      intronic chr17:40056504(-) A-I      intronic chr17:40037955(-) A-I      intronic chr17:40033669(-) A-I      intronic chr17:40031437(-) A-I      intronic chr17:40037581(-) A-I      intronic chr17:40041408(-) A-I      intronic chr17:40058521(-) A-I      intronic chr17:40059317(-) A-I      intronic chr17:40030991(-) A-I      intronic chr17:40045259(-) A-I      intronic chr17:40041024(-) A-I      intronic chr17:40058627(-) A-I      intronic chr17:40060318(-) A-I      intronic chr17:40058539(-) A-I      intronic chr17:40060207(-) A-I      intronic chr17:40059245(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ACLY	chr17:40024107(-) A-I exon CDS    22327324 chr17:40031536(-) C-T intron -    22484847 chr17:40041024(-) A-G intron -    22484847 chr17:40059240(-) A-G intron -    22484847 chr17:40059241(-) A-G intron -    22484847 chr17:40059245(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ACLY	chr17:40023920-40023921(-) m6A 3'UTR       24981863//22575960 chr17:40023947-40023948(-) m6A 3'UTR       24981863//22575960 chr17:40023995-40023996(-) m6A 3'UTR       24981863//26404942//22575960 chr17:40024028-40024029(-) m6A 3'UTR//exon       24981863//26404942 chr17:40024035-40024036(-) m6A 3'UTR//exon       24981863//26404942 chr17:40024050-40024051(-) m6A 3'UTR//exon       24981863//26404942 chr17:40024077-40024078(-) m6A CDS//exon       26404942 chr17:40025826-40025827(-) m6A CDS//exon       - chr17:40025835-40025836(-) m6A CDS//exon       - chr17:40026620-40026621(-) m6A exon//intron       - chr17:40026631-40026632(-) m6A exon//intron       - chr17:40026679-40026680(-) m6A exon//intron       - chr17:40026701-40026702(-) m6A exon//intron       - chr17:40026944-40026945(-) m6A exon//intron       24981863 chr17:40026960-40026961(-) m6A exon//intron       24981863 chr17:40027988-40027989(-) Am CDS       - chr17:40027996-40027997(-) m6A CDS       22575960 chr17:40028321-40028322(-) m6A CDS       22575960 chr17:40030158-40030159(-) m6A CDS       22575960 chr17:40030197-40030198(-) m6A CDS       22575960 chr17:40034371-40034372(-) m6A CDS       22575960 chr17:40035115-40035116(-) m6A CDS       22575960 chr17:40035131-40035132(-) m6A CDS       22575960 chr17:40039395-40039396(-) Tm CDS       - chr17:40040447-40040448(-) Gm CDS       - chr17:40040482-40040483(-) m6A CDS       22575960 chr17:40042367-40042368(-) m6A CDS       22575960 chr17:40042407-40042408(-) m6A CDS       27773535//22575960 chr17:40042486-40042487(-) m6A CDS       27773535//22575960 chr17:40042505-40042506(-) m6A CDS       27773535//22575960 chr17:40043860-40043861(-) m6A CDS       27773535 chr17:40043885-40043886(-) m6A CDS       27773535 chr17:40043949-40043950(-) m6A CDS       27773535 chr17:40048541-40048542(-) m6A CDS       27773535 chr17:40048548-40048549(-) m6A CDS       27773535 chr17:40048587-40048588(-) Y CDS       26075521 chr17:40048637-40048638(-) m6A CDS       27773535 chr17:40049345-40049346(-) m6A CDS       27773536 chr17:40049370-40049371(-) m6A CDS       27773536 chr17:40054073-40054074(-) m6A CDS       27773535//22575960 chr17:40054914-40054915(-) m6A CDS       27773535//22575960 chr17:40054996-40054997(-) m6A CDS       27773535//22575960 chr17:40055032-40055033(-) m6A CDS       27773535//22575960 chr17:40060702-40060703(-) m6A exon//intron       - chr17:40060760-40060761(-) m6A exon//intron       27773535 chr17:40061813-40061814(-) m6A 5'UTR//CDS//exon//intron       26404942//27773535//22575960 chr17:40061831-40061832(-) m6A 5'UTR//CDS//exon//intron       26404942//27773535//22575960 chr17:40061869-40061870(-) m6A 5'UTR//CDS//exon//intron       26404942//27773535//22575960 chr17:40062817-40062818(-) m6A CDS//intron       26404942//27773535//22575960 chr17:40062837-40062838(-) m6A CDS//intron       26404942//27773535//22575960 chr17:40062882-40062883(-) m6A CDS//exon//intron       26404942//27773535//22575960 chr17:40065821-40065822(-) m6A CDS//exon//intron       22575960 chr17:40065909-40065910(-) m6A CDS//exon//intron       27773535//22575960 chr17:40066508-40066509(-) m6A CDS//exon//intron       27773535//22575960 chr17:40068684-40068685(-) m6A CDS//intron       22575960 chr17:40068750-40068751(-) m6A CDS//intron       22575960 chr17:40068775-40068776(-) m6A CDS//intron       22575960 chr17:40069989-40069990(-) m6A CDS//intron       22575960 chr17:40070010-40070011(-) m6A CDS//intron       22575960 chr17:40070087-40070088(-) m6A CDS//intron       27371828//22575960 chr17:40075143-40075144(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27371828//27773536//22575960 chr17:40075158-40075159(-) m1A 5'UTR//exon//intron       26863196//26863410 chr17:40075234-40075235(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//27773536 chr17:40086659-40086660(-) m6A 5'UTR       24981863 chr17:40086671-40086672(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ACLY	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H8-5p
Interactor2: ACLY

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg