Basic Information:

  VIRBase ID:  

VHID00104061

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H8-5p:  MIMAT0012597          EEF1E1-BLOC1S5:  NR_037618     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H8-5p	EEF1E1-BLOC1S5
miRBase Accession/Entrez ID	MIMAT0012597	100526837
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	lncRNA
Alias	-	EEF1E1-MUTED

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt	PMID
LincSNP 3.0	EEF1E1-BLOC1S5	rs2748376 chr6:8014896 C/T         17873874 rs2815151 chr6:8014757 C/T         17873874 rs12526001 chr6:8091292 C/G         19571811 rs9392194 chr6:8043702 A/G         20081858 rs2815164 chr6:8080788 A/G         20081858 rs9379164 chr6:8084916 C/G         20081858 rs17531 chr6:8096071 C/T         20081858 rs12663094 chr6:8018184 A/G         20383146 rs2743992 chr6:8054489 A/G         20383146 rs2815136 chr6:8031390 A/C         20502693 rs2748377 chr6:8017615 C/G         20502693 rs9328451 chr6:8017839 C/T         20502693 rs12663430 chr6:8060301 C/T         20502693 rs9505351 chr6:8066053 G/T         20502693 rs6926897 chr6:8091444 A/T         20686565 rs2743982 chr6:8072562 C/G         20686565 rs2744011 chr6:8074250 C/T         20686565 rs2744013 chr6:8073135 C/T         20686565 rs2744009 chr6:8026736 A/G         20881960 rs2815163 chr6:8017131 A/G         20881960 rs2815167 chr6:8017543 A/G         20881960 rs9405365 chr6:8017039 A/G         20881960 rs2326978 chr6:8039007 A/G         20881960 rs2815142 chr6:8043313 A/G         20881960 rs2743993 chr6:8054180 A/G         20881960 rs2815137 chr6:8036717 A/T         20881960 rs9392195 chr6:8043744 A/T         20881960 rs2057185 chr6:8015856 C/T         20881960 rs9328452 chr6:8026344 C/T         20881960 rs2815143 chr6:8043399 C/T         20881960 rs2743989 chr6:8063802 C/T         20881960 rs2815128 chr6:8023229 G/T         20881960 rs6905338 chr6:8076736 G/T         21355061 rs2748378 chr6:8018168 A/G         21637794 rs2027132 chr6:8074246 A/G         21909115 rs6933743 chr6:8071495 C/T         21909115 rs7768487 chr6:8101402 C/T         21909115 rs7748993 chr6:8077762 A/T         22182935 rs2326975 chr6:8069089 C/T         22210626 rs2206098 chr6:8046369 A/G         22484627 rs2815152 chr6:8063221 C/G         22484627 rs11243222 chr6:8027169 A/G         22504419 rs12199940 chr6:8016352 A/G         22504419 rs6915432 chr6:8040727 A/G         22504419 rs12213108 chr6:8042330 A/G         22504419 rs13218209 chr6:8037916 A/G         22504419 rs2294435 chr6:8057687 A/G         22504419 rs12207627 chr6:8062299 A/G         22504419 rs9392200 chr6:8088031 A/G         22504419 rs9502681 chr6:8089907 A/G         22504419 rs9378519 chr6:8071439 A/T         22504419 rs12524282 chr6:8054627 C/G         22504419 rs12525698 chr6:8050592 C/G         22504419 rs12197549 chr6:8085645 C/G         22504419 rs3734590 chr6:8015487 C/T         22504419 rs3734591 chr6:8015588 C/T         22504419 rs9392948 chr6:8017092 C/T         22504419 rs10458106 chr6:8020234 C/T         22504419 rs10458217 chr6:8015042 C/T         22504419 rs11243221 chr6:8027112 C/T         22504419 rs6907363 chr6:8036085 C/T         22504419 rs7765935 chr6:8037643 C/T         22504419 rs12111405 chr6:8035976 C/T         22504419 rs2294436 chr6:8057455 C/T         22504419 rs12524402 chr6:8050157 C/T         22504419 rs12526444 chr6:8054557 C/T         22504419 rs12529164 chr6:8050552 C/T         22504419 rs2815161 chr6:8075464 C/T         22504419 rs12199241 chr6:8086267 C/T         22504419 rs12194156 chr6:8043239 G/T         22504419 rs7745644 chr6:8046015 G/T         22504419 rs7765563 chr6:8055022 G/T         22504419 rs11243228 chr6:8053625 G/T         22504419 rs2815147 chr6:8051707 A/C         23202124 rs17606242 chr6:8083666 A/G         23202125 rs12195465 chr6:8075433 A/G         23388002 rs9392959 chr6:8081262 A/G         23388002 rs2743984 chr6:8070469 A/T         23388002 rs2744012 chr6:8073152 C/T         23388002 rs2815160 chr6:8075321 C/T         23388002 rs9392958 chr6:8071329 C/T         23388002 rs9505356 chr6:8083745 C/T         23388002 rs9392962 chr6:8102257 C/T         23388002 rs4441993 chr6:8086034 A/G         23455636 rs12526952 chr6:8093320 C/T         23455636 rs17696807 chr6:8084835 C/G         23722424 rs7762614 chr6:8049527 G/A         24665060 rs2207720 chr6:8018964 T/C         24665060 rs9379163 chr6:8084644 C/T         -

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EEF1E1-BLOC1S5	chr6:8072399(-) A-I      intronic chr6:8072786(-) A-I      intronic chr6:8072762(-) A-I      intronic chr6:8073022(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EEF1E1-BLOC1S5	chr6:8016008-8016009(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr6:8016028-8016029(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr6:8018050-8018051(-) m6A intron       24284625//24209618//24981863//27773535//27371828//22608085 chr6:8026614-8026615(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27773536//22608085 chr6:8026629-8026630(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27773536//22608085 chr6:8041397-8041398(-) m6A 3'UTR       27773535 chr6:8041409-8041410(-) m6A 3'UTR       27773535 chr6:8041432-8041433(-) m6A 3'UTR       27773535 chr6:8041440-8041441(-) m6A 3'UTR       27773535 chr6:8041454-8041455(-) m6A 3'UTR       27773535 chr6:8064538-8064539(-) m6A intron       24981863 chr6:8064587-8064588(-) m6A intron       24981863 chr6:8064593-8064594(-) m6A intron       24981863 chr6:8064618-8064619(-) m6A intron       24981863 chr6:8073631-8073632(-) m6A intron       27773535 chr6:8073643-8073644(-) m6A intron       27773535 chr6:8073662-8073663(-) m6A intron       27773535 chr6:8073674-8073675(-) m6A intron       27773535 chr6:8073688-8073689(-) m6A intron       27773535 chr6:8080052-8080053(-) m6A intron       24981863 chr6:8080060-8080061(-) m6A intron       24981863 chr6:8080147-8080148(-) m6A intron       24284625//24981863 chr6:8097684-8097685(-) m6A CDS       24981863//27773535//27371828 chr6:8102006-8102007(-) m6A intron       24981863//27773535//27371828 chr6:8102107-8102108(-) m6A intron       24981863 chr6:8102709-8102710(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EEF1E1-BLOC1S5	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H8-5p
Interactor2: EEF1E1-BLOC1S5

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg