Basic Information:

  VIRBase ID:  

VHID00103803

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-3p:  MIMAT0012596          C1QTNF1:  NR_049769     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H7-3p	C1QTNF1
miRBase Accession/Entrez ID	MIMAT0012596	114897
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CTRP1//GIP//ZSIG37

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	C1QTNF1	chr17:77035588(+) A-I      intronic chr17:77035575(+) A-I      intronic chr17:77035576(+) A-I      intronic chr17:77035582(+) A-I      intronic chr17:77035615(+) A-I      intronic chr17:77035627(+) A-I      intronic chr17:77035647(+) A-I      intronic chr17:77035649(+) A-I      intronic chr17:77035650(+) A-I      intronic chr17:77028974(+) A-I      intronic chr17:77028989(+) A-I      intronic chr17:77028985(+) A-I      intronic chr17:77028964(+) A-I      intronic chr17:77035570(+) A-I      intronic chr17:77028994(+) A-I      intronic chr17:77022355(+) A-I      intronic chr17:77022433(+) A-I      intronic chr17:77026705(+) A-I      intronic chr17:77026782(+) A-I      intronic chr17:77026811(+) A-I      intronic chr17:77027778(+) A-I      intronic chr17:77028963(+) A-I      intronic chr17:77028971(+) A-I      intronic chr17:77029099(+) A-I      intronic chr17:77029140(+) A-I      intronic chr17:77029141(+) A-I      intronic chr17:77029536(+) A-I      intronic chr17:77029537(+) A-I      intronic chr17:77027802(+) A-I      intronic chr17:77029597(+) A-I      intronic chr17:77029677(+) A-I      intronic chr17:77029703(+) A-I      intronic chr17:77029737(+) A-I      intronic chr17:77031612(+) A-I      intronic chr17:77031617(+) A-I      intronic chr17:77032305(+) A-I      intronic chr17:77032533(+) A-I      intronic chr17:77033850(+) A-I      intronic chr17:77036284(+) A-I      intronic chr17:77036286(+) A-I      intronic chr17:77036313(+) A-I      intronic chr17:77036865(+) A-I      intronic chr17:77036875(+) A-I      intronic chr17:77036920(+) A-I      intronic chr17:77031702(+) A-I      intronic chr17:77037659(+) A-I      intronic chr17:77037810(+) A-I      intronic chr17:77022331(+) A-I      intronic chr17:77028887(+) A-I      intronic chr17:77027347(+) A-I      intronic chr17:77033937(+) A-I      intronic chr17:77028894(+) A-I      intronic chr17:77031693(+) A-I      intronic chr17:77035558(+) A-I      intronic chr17:77035573(+) A-I      intronic chr17:77031654(+) A-I      intronic chr17:77029100(+) A-I      intronic chr17:77036366(+) A-I      intronic chr17:77036720(+) A-I      intronic chr17:77032357(+) A-I      intronic chr17:77032422(+) A-I      intronic chr17:77032396(+) A-I      intronic chr17:77036751(+) A-I      intronic chr17:77029641(+) A-I      intronic chr17:77028907(+) A-I      intronic chr17:77036400(+) A-I      intronic chr17:77027361(+) A-I      intronic chr17:77033893(+) A-I      intronic chr17:77035684(+) A-I      intronic chr17:77035559(+) A-I      intronic chr17:77036426(+) A-I      intronic chr17:77029714(+) A-I      intronic chr17:77031696(+) A-I      intronic chr17:77032386(+) A-I      intronic chr17:77031652(+) A-I      intronic chr17:77029657(+) A-I      intronic chr17:77026707(+) A-I      intronic chr17:77032280(+) A-I      intronic chr17:77027227(+) A-I      intronic chr17:77032459(+) A-I      intronic chr17:77036729(+) A-I      intronic chr17:77033312(+) A-I      intronic chr17:77035574(+) A-I      intronic chr17:77029667(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	C1QTNF1	chr17:77035558(+) A-I intron -    15258596 chr17:77035559(+) A-I intron -    15258596 chr17:77035573(+) A-I intron -    15258596 chr17:77035574(+) A-I intron -    15258596 chr17:77035684(+) A-I intron -    15258596

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C1QTNF1	chr17:77019151-77019152(+) m6A 5'UTR       24981863 chr17:77020319-77020320(+) m6A 5'UTR//exon//intron       24981863 chr17:77020346-77020347(+) m6A 5'UTR//exon//intron       24981863 chr17:77020355-77020356(+) m6A 5'UTR//exon//intron       24981863 chr17:77020393-77020394(+) m6A 5'UTR//exon//intron       24981863 chr17:77020452-77020453(+) m6A 5'UTR//exon//intron       24981863 chr17:77020501-77020502(+) m6A 5'UTR//exon//intron       24981863 chr17:77021839-77021840(+) m6A 5'UTR//intron       24981863 chr17:77021845-77021846(+) m6A 5'UTR//intron       24981863 chr17:77042674-77042675(+) m6A 5'UTR//CDS       24284625 chr17:77043287-77043288(+) m6A exon//intron       24981863 chr17:77043669-77043670(+) m6A CDS//exon       24284625//24981863 chr17:77043701-77043702(+) m6A CDS//exon       24284625//24981863 chr17:77043841-77043842(+) m6A CDS//exon       24284625 chr17:77043931-77043932(+) m6A CDS//exon       24284625 chr17:77043942-77043943(+) m6A CDS//exon       24284625 chr17:77044054-77044055(+) m6A CDS//exon       24284625//24981863 chr17:77044117-77044118(+) m6A CDS//exon       24284625//24981863//26404942 chr17:77044250-77044251(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942 chr17:77044388-77044389(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960 chr17:77044398-77044399(+) m6A 3'UTR       24284625//24981863//26404942//22575960 chr17:77044547-77044548(+) m6A 3'UTR       24981863//26404942 chr17:77044557-77044558(+) m6A 3'UTR       24284625//24981863//26404942 chr17:77044632-77044633(+) m6A 3'UTR       24284625//24981863//26404942 chr17:77044696-77044697(+) m6A 3'UTR       24284625//24981863//26404942 chr17:77044732-77044733(+) m6A 3'UTR       24981863//26404942 chr17:77044753-77044754(+) m6A 3'UTR       24981863//26404942 chr17:77045478-77045479(+) m6A 3'UTR       24284625//24981863 chr17:77045540-77045541(+) m6A 3'UTR       24284625//24981863 chr17:77045556-77045557(+) m6A 3'UTR       24284625//24981863 chr17:77045628-77045629(+) m6A 3'UTR       24284625//24981863 chr17:77045743-77045744(+) m6A 3'UTR       24284625//24981863 chr17:77045758-77045759(+) m6A 3'UTR       24284625//24981863 chr17:77045841-77045842(+) m6A 3'UTR       24981863 chr17:77045848-77045849(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C1QTNF1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H7-3p
Interactor2: C1QTNF1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg