Basic Information:

  VIRBase ID:  

VHID00103663

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-3p:  MIMAT0012596          DCLRE1B:  NM_001319947     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H7-3p	DCLRE1B
miRBase Accession/Entrez ID	MIMAT0012596	64858
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	APOLLO//SNM1B//SNMIB

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DCLRE1B	chr1:114455407(+) A-I      3'UTR chr1:114450997(+) A-I      intronic chr1:114448818(+) A-I      intronic chr1:114448743(+) A-I      intronic chr1:114453140(+) A-I      intronic chr1:114448778(+) A-I      intronic chr1:114453224(+) A-I      intronic chr1:114451078(+) A-I      intronic chr1:114448758(+) A-I      intronic chr1:114448783(+) A-I      intronic chr1:114448753(+) A-I      intronic chr1:114450991(+) A-I      intronic chr1:114453386(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DCLRE1B	chr1:114448743(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DCLRE1B	chr1:114448248-114448249(+) m6A CDS//exon       24284625 chr1:114448311-114448312(+) m6A CDS//exon       24284625 chr1:114450787-114450788(+) m6A CDS//exon       24981863 chr1:114453911-114453912(+) m6A CDS//exon       24284625//24209618//24981863 chr1:114453950-114453951(+) m6A CDS//exon       24284625//24209618//24981863 chr1:114453955-114453956(+) m6A CDS//exon       24284625//24209618//24981863 chr1:114454136-114454137(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114454175-114454176(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114454212-114454213(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114454258-114454259(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114454319-114454320(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114454344-114454345(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114454364-114454365(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114454442-114454443(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114454552-114454553(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114454742-114454743(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:114454803-114454804(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:114454815-114454816(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:114454927-114454928(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114454964-114454965(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114455131-114455132(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr1:114455141-114455142(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr1:114455197-114455198(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr1:114455306-114455307(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr1:114455393-114455394(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr1:114455419-114455420(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr1:114455494-114455495(+) m6A 3'UTR//exon       24209618//22608085 chr1:114455553-114455554(+) m6A 3'UTR//exon       24209618 chr1:114455578-114455579(+) m6A 3'UTR//exon       24209618 chr1:114455594-114455595(+) m6A 3'UTR//exon       24209618 chr1:114455830-114455831(+) m6A 3'UTR//exon       24209618//24981863//22608085 chr1:114455890-114455891(+) m6A 3'UTR//exon       24209618//24981863//22608085 chr1:114455918-114455919(+) m6A 3'UTR//exon       24209618//24981863//22608085 chr1:114455934-114455935(+) m6A 3'UTR//exon       24209618//24981863//22608085 chr1:114456141-114456142(+) m6A 3'UTR//exon       22608085 chr1:114456149-114456150(+) m6A 3'UTR//exon       24981863//22608085 chr1:114456225-114456226(+) m6A 3'UTR//exon       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DCLRE1B	Chromatin K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H7-3p
Interactor2: DCLRE1B

Evidence Support:

Prediction-Evidence	PITA//RNAHybrid//Targetscan
Support Database	VmiReg