Detail Information

Basic Information:


  VIRBase ID:  

VHID00103538

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-3p:           TRIT1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H7-3p TRIT1
miRBase
Accession/Entrez ID		 MIMAT0012596 54802
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - COXPD35//GRO1//hGRO1//IPPT//IPT//IPTase//MOD5

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TRIT1
chr1:40326157(-) A-I      intronic
chr1:40334278(-) A-I      intronic
chr1:40321854(-) A-I      intronic
chr1:40320697(-) A-I      intronic
chr1:40320668(-) A-I      intronic
chr1:40321318(-) A-I      intronic
chr1:40326123(-) A-I      intronic
chr1:40326130(-) A-I      intronic
chr1:40326156(-) A-I      intronic
chr1:40339587(-) A-I      intronic
chr1:40336778(-) A-I      intronic
chr1:40334694(-) A-I      intronic
chr1:40334688(-) A-I      intronic
chr1:40334632(-) A-I      intronic
chr1:40334620(-) A-I      intronic
chr1:40334277(-) A-I      intronic
chr1:40334234(-) A-I      intronic
chr1:40334233(-) A-I      intronic
chr1:40334204(-) A-I      intronic
chr1:40334197(-) A-I      intronic
chr1:40334135(-) A-I      intronic
chr1:40334080(-) A-I      intronic
chr1:40333821(-) A-I      intronic
chr1:40333784(-) A-I      intronic
chr1:40333783(-) A-I      intronic
chr1:40333717(-) A-I      intronic
chr1:40329692(-) A-I      intronic
chr1:40328993(-) A-I      intronic
chr1:40325023(-) A-I      intronic
chr1:40321866(-) A-I      intronic
chr1:40321597(-) A-I      intronic
chr1:40320713(-) A-I      intronic
chr1:40330197(-) A-I      intronic
chr1:40320696(-) A-I      intronic
chr1:40320561(-) A-I      intronic
chr1:40317508(-) A-I      intronic
chr1:40316115(-) A-I      intronic
chr1:40344803(-) A-I      intronic
chr1:40333020(-) A-I      intronic
chr1:40332955(-) A-I      intronic
chr1:40332929(-) A-I      intronic
chr1:40332920(-) A-I      intronic
chr1:40332582(-) A-I      intronic
chr1:40332581(-) A-I      intronic
chr1:40332552(-) A-I      intronic
chr1:40332546(-) A-I      intronic
chr1:40332439(-) A-I      intronic
chr1:40331902(-) A-I      intronic
chr1:40331471(-) A-I      intronic
chr1:40331410(-) A-I      intronic
chr1:40330194(-) A-I      intronic
chr1:40330165(-) A-I      intronic
chr1:40330159(-) A-I      intronic
chr1:40330157(-) A-I      intronic
chr1:40330100(-) A-I      intronic
chr1:40330047(-) A-I      intronic
chr1:40329762(-) A-I      intronic
chr1:40344858(-) A-I      intronic
chr1:40344854(-) A-I      intronic
chr1:40344816(-) A-I      intronic
chr1:40344806(-) A-I      intronic
chr1:40344776(-) A-I      intronic
chr1:40341074(-) A-I      intronic
chr1:40341048(-) A-I      intronic
chr1:40340977(-) A-I      intronic
chr1:40340457(-) A-I      intronic
chr1:40340454(-) A-I      intronic
chr1:40339604(-) A-I      intronic
chr1:40339601(-) A-I      intronic
chr1:40329712(-) A-I      intronic
chr1:40337786(-) A-I      intronic
chr1:40337771(-) A-I      intronic
chr1:40337741(-) A-I      intronic
chr1:40337690(-) A-I      intronic
chr1:40337673(-) A-I      intronic
chr1:40337659(-) A-I      intronic
chr1:40337183(-) A-I      intronic
chr1:40337112(-) A-I      intronic
chr1:40317412(-) A-I      3'UTR
chr1:40341038(-) A-I      intronic
chr1:40319106(-) A-I      intronic
chr1:40319193(-) A-I      intronic
chr1:40331910(-) A-I      intronic
chr1:40331983(-) A-I      intronic
chr1:40334685(-) A-I      intronic
chr1:40331274(-) A-I      intronic
chr1:40337862(-) A-I      intronic
chr1:40341060(-) A-I      intronic
chr1:40331438(-) A-I      intronic
chr1:40337071(-) A-I      intronic
chr1:40321633(-) A-I      intronic
chr1:40337825(-) A-I      intronic
chr1:40339648(-) A-I      intronic
chr1:40334058(-) A-I      intronic
chr1:40329049(-) A-I      intronic
chr1:40334259(-) A-I      intronic
chr1:40331335(-) A-I      intronic
chr1:40322087(-) A-I      intronic
chr1:40337605(-) A-I      intronic
chr1:40329724(-) A-I      intronic
chr1:40331985(-) A-I      intronic
chr1:40340475(-) A-I      intronic
chr1:40320688(-) A-I      intronic
chr1:40314351(-) A-I      intronic
chr1:40319232(-) A-I      intronic
chr1:40337782(-) A-I      intronic
chr1:40321593(-) A-I      intronic
chr1:40340994(-) A-I      intronic
chr1:40334610(-) A-I      intronic
chr1:40340918(-) A-I      intronic
chr1:40340502(-) A-I      intronic
chr1:40339530(-) A-I      intronic
chr1:40331941(-) A-I      intronic
chr1:40337801(-) A-I      intronic
chr1:40333728(-) A-I      intronic
chr1:40329696(-) A-I      intronic
chr1:40337086(-) A-I      intronic
chr1:40321939(-) A-I      intronic
chr1:40334142(-) A-I      intronic
chr1:40331917(-) A-I      intronic
chr1:40344752(-) A-I      intronic
chr1:40320678(-) A-I      intronic
chr1:40330092(-) A-I      intronic
chr1:40332604(-) A-I      intronic
chr1:40321330(-) A-I      intronic
chr1:40336802(-) A-I      intronic
chr1:40320742(-) A-I      intronic
chr1:40331951(-) A-I      intronic
chr1:40320568(-) A-I      intronic
chr1:40333054(-) A-I      intronic
chr1:40333755(-) A-I      intronic
chr1:40329837(-) A-I      intronic
chr1:40329702(-) A-I      intronic
chr1:40332578(-) A-I      intronic
chr1:40320617(-) A-I      intronic
chr1:40322012(-) A-I      intronic
chr1:40331942(-) A-I      intronic
chr1:40337784(-) A-I      intronic
chr1:40333813(-) A-I      intronic
chr1:40331459(-) A-I      intronic
chr1:40340905(-) A-I      intronic
chr1:40321937(-) A-I      intronic
chr1:40329132(-) A-I      intronic
chr1:40320549(-) A-I      intronic
chr1:40340476(-) A-I      intronic
chr1:40314329(-) A-I      intronic
chr1:40320691(-) A-I      intronic
chr1:40317583(-) A-I      intronic
chr1:40334132(-) A-I      intronic
chr1:40332548(-) A-I      intronic
chr1:40333749(-) A-I      intronic
chr1:40332441(-) A-I      intronic
chr1:40336818(-) A-I      intronic
chr1:40333745(-) A-I      intronic
chr1:40337815(-) A-I      intronic
chr1:40334699(-) A-I      intronic
chr1:40337712(-) A-I      intronic
chr1:40319228(-) A-I      intronic
chr1:40331427(-) A-I      intronic
chr1:40334127(-) A-I      intronic
chr1:40336721(-) A-I      intronic
chr1:40344928(-) A-I      intronic
chr1:40333781(-) A-I      intronic
chr1:40340567(-) A-I      intronic
chr1:40332956(-) A-I      intronic
chr1:40337807(-) A-I      intronic
chr1:40329023(-) A-I      intronic
chr1:40341108(-) A-I      intronic
chr1:40321590(-) A-I      intronic
chr1:40331439(-) A-I      intronic
chr1:40340615(-) A-I      intronic
chr1:40337834(-) A-I      intronic
chr1:40320680(-) A-I      intronic
chr1:40320658(-) A-I      intronic
chr1:40321657(-) A-I      intronic
chr1:40342918(-) A-I      intronic
chr1:40337725(-) A-I      intronic
chr1:40332426(-) A-I      intronic
chr1:40314241(-) A-I      intronic
chr1:40329757(-) A-I      intronic
chr1:40339625(-) A-I      intronic
chr1:40332650(-) A-I      intronic
chr1:40320684(-) A-I      intronic
chr1:40322074(-) A-I      intronic
chr1:40331956(-) A-I      intronic
chr1:40320699(-) A-I      intronic
chr1:40320689(-) A-I      intronic
chr1:40328952(-) A-I      intronic
chr1:40344927(-) A-I      intronic
chr1:40329701(-) A-I      intronic
chr1:40319205(-) A-I      intronic
chr1:40339430(-) A-I      intronic
chr1:40320687(-) A-I      intronic
chr1:40340908(-) A-I      intronic
chr1:40337238(-) A-I      intronic
chr1:40329754(-) A-I      intronic
chr1:40346636(-) A-I      intronic
chr1:40326718(-) A-I      intronic
chr1:40322034(-) A-I      intronic
chr1:40332422(-) A-I      intronic
chr1:40330234(-) A-I      intronic
chr1:40321682(-) A-I      intronic
chr1:40317397(-) A-I      3'UTR
chr1:40337872(-) A-I      intronic
chr1:40336631(-) A-I      intronic
chr1:40329046(-) A-I      intronic
chr1:40337613(-) A-I      intronic
chr1:40337738(-) A-I      intronic
chr1:40339439(-) A-I      intronic
chr1:40333773(-) A-I      intronic
chr1:40329704(-) A-I      intronic
chr1:40331982(-) A-I      intronic
chr1:40332950(-) A-I      intronic
chr1:40317404(-) A-I      3'UTR
chr1:40337157(-) A-I      intronic
chr1:40337660(-) A-I      intronic
chr1:40334649(-) A-I      intronic
chr1:40320690(-) A-I      intronic
chr1:40332601(-) A-I      intronic
chr1:40334540(-) A-I      intronic
chr1:40324810(-) A-I      intronic
chr1:40333823(-) A-I      intronic
chr1:40326601(-) A-I      intronic
chr1:40340430(-) A-I      intronic
chr1:40332387(-) A-I      intronic
chr1:40345803(-) A-I      intronic
chr1:40337610(-) A-I      intronic
chr1:40321856(-) A-I      intronic
chr1:40321947(-) A-I      intronic
chr1:40334727(-) A-I      intronic
chr1:40337184(-) A-I      intronic
chr1:40332542(-) A-I      intronic
chr1:40337140(-) A-I      intronic
chr1:40320623(-) A-I      intronic
chr1:40325247(-) A-I      intronic
chr1:40329847(-) A-I      intronic
chr1:40334475(-) A-I      intronic
chr1:40339682(-) A-I      intronic
chr1:40320693(-) A-I      intronic
chr1:40344829(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TRIT1
chr1:40320680(-) A-I intron -    22327324
chr1:40337872(-) A-I intron -    22327324
chr1:40319228(-) A-G intron -    22484847
chr1:40320568(-) A-G intron -    22484847
chr1:40320623(-) A-G intron -    22484847
chr1:40320680(-) A-G intron -    22484847
chr1:40320684(-) A-G intron -    22484847
chr1:40321590(-) A-G intron -    22484847
chr1:40321633(-) A-G intron -    22484847
chr1:40321657(-) A-G intron -    22484847
chr1:40321856(-) A-G intron -    22484847
chr1:40321937(-) A-G intron -    22484847
chr1:40321939(-) A-G intron -    22484847
chr1:40321947(-) A-G intron -    22484847
chr1:40322034(-) A-G intron -    22484847
chr1:40322074(-) A-G intron -    22484847
chr1:40329023(-) A-G intron -    22484847
chr1:40329046(-) A-G intron -    22484847
chr1:40329696(-) A-G intron -    22484847
chr1:40329701(-) A-G intron -    22484847
chr1:40329702(-) A-G intron -    22484847
chr1:40329704(-) A-G intron -    22484847
chr1:40329754(-) A-G intron -    22484847
chr1:40329757(-) A-G intron -    22484847
chr1:40329837(-) A-G intron -    22484847
chr1:40329847(-) A-G intron -    22484847
chr1:40330092(-) A-G intron -    22484847
chr1:40330234(-) A-G intron -    22484847
chr1:40331363(-) C-T intron -    22484847
chr1:40331427(-) A-G intron -    22484847
chr1:40331439(-) A-G intron -    22484847
chr1:40331917(-) A-G intron -    22484847
chr1:40331941(-) A-G intron -    22484847
chr1:40331956(-) A-G intron -    22484847
chr1:40331982(-) A-G intron -    22484847
chr1:40331985(-) A-G intron -    22484847
chr1:40332422(-) A-G intron -    22484847
chr1:40332426(-) A-G intron -    22484847
chr1:40332441(-) A-G intron -    22484847
chr1:40332542(-) A-G intron -    22484847
chr1:40332548(-) A-G intron -    22484847
chr1:40332578(-) A-G intron -    22484847
chr1:40332604(-) A-G intron -    22484847
chr1:40332650(-) A-G intron -    22484847
chr1:40332950(-) A-G intron -    22484847
chr1:40332956(-) A-G intron -    22484847
chr1:40333054(-) A-G intron -    22484847
chr1:40333728(-) A-G intron -    22484847
chr1:40333745(-) A-G intron -    22484847
chr1:40333749(-) A-G intron -    22484847
chr1:40333755(-) A-G intron -    22484847
chr1:40333773(-) A-G intron -    22484847
chr1:40333781(-) A-G intron -    22484847
chr1:40333813(-) A-G intron -    22484847
chr1:40333823(-) A-G intron -    22484847
chr1:40334058(-) A-G intron -    22484847
chr1:40334127(-) A-G intron -    22484847
chr1:40334142(-) A-G intron -    22484847
chr1:40334540(-) A-G intron -    22484847
chr1:40334610(-) A-G intron -    22484847
chr1:40334649(-) A-G intron -    22484847
chr1:40334685(-) A-G intron -    22484847
chr1:40336721(-) A-G intron -    22484847
chr1:40336802(-) A-G intron -    22484847
chr1:40337071(-) A-G intron -    22484847
chr1:40337086(-) A-G intron -    22484847
chr1:40337140(-) A-G intron -    22484847
chr1:40337157(-) A-G intron -    22484847
chr1:40337184(-) A-G intron -    22484847
chr1:40337238(-) A-G intron -    22484847
chr1:40337610(-) A-G intron -    22484847
chr1:40337862(-) A-G intron -    22484847
chr1:40337872(-) A-G intron -    22484847
chr1:40339530(-) A-G intron -    22484847
chr1:40339625(-) A-G intron -    22484847
chr1:40339682(-) A-G intron -    22484847
chr1:40340430(-) A-G intron -    22484847
chr1:40340475(-) A-G intron -    22484847
chr1:40340476(-) A-G intron -    22484847
chr1:40340615(-) A-G intron -    22484847
chr1:40341038(-) A-G intron -    22484847
chr1:40341108(-) A-G intron -    22484847
chr1:40344829(-) A-G intron -    22484847
chr1:40344928(-) A-G intron -    22484847
chr1:40345844(-) A-T intron -    22484847
chr1:40345845(-) G-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TRIT1
chr1:40306832-40306833(-) m6A 3'UTR       24981863//27773535//22608085
chr1:40306839-40306840(-) m6A 3'UTR       24981863//27773535//22608085
chr1:40306847-40306848(-) m6A 3'UTR       24981863//27773535//22608085
chr1:40306869-40306870(-) m6A 3'UTR       24981863//27773535//22608085
chr1:40306907-40306908(-) m6A 3'UTR       24981863//27773535//22608085
chr1:40306912-40306913(-) m6A 3'UTR       24981863//27773535//22608085
chr1:40307411-40307412(-) m6A 3'UTR//exon       24981863
chr1:40307472-40307473(-) m6A 3'UTR//CDS//exon       24981863//22608085
chr1:40307485-40307486(-) m6A 3'UTR//CDS//exon       24981863//22608085
chr1:40307530-40307531(-) m6A 3'UTR//CDS//exon       24981863//22608085
chr1:40307557-40307558(-) m6A 3'UTR//CDS//exon       24981863//22608085
chr1:40349086-40349087(-) Y 5'UTR//CDS//exon       26075521
chr1:40349099-40349100(-) m6A 5'UTR//CDS//exon       24981863//27371828//27773536
chr1:40349173-40349174(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TRIT1
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H7-3p
Interactor2: TRIT1

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid
Support Database VmiReg

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