Basic Information:

  VIRBase ID:  

VHID00103417

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-3p:  MIMAT0012596          ZNF385A:  NM_001130968     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H7-3p	ZNF385A
miRBase Accession/Entrez ID	MIMAT0012596	25946
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HZF//RZF//ZFP385//ZNF385

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF385A	chr12:54776714(-) A-I      intronic chr12:54776818(-) A-I      intronic chr12:54766023(-) A-I      intronic chr12:54777567(-) A-I      intronic chr12:54777634(-) A-I      intronic chr12:54777557(-) A-I      intronic chr12:54776834(-) A-I      intronic chr12:54776947(-) A-I      intronic chr12:54776016(-) A-I      intronic chr12:54776863(-) A-I      intronic chr12:54777751(-) A-I      intronic chr12:54775296(-) A-I      intronic chr12:54774181(-) A-I      intronic chr12:54775083(-) A-I      intronic chr12:54775282(-) A-I      intronic chr12:54766630(-) A-I      intronic chr12:54765906(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF385A	chr12:54763178-54763179(-) m6A 3'UTR       24284625//24981863//28052920//27773535 chr12:54763269-54763270(-) m6A 3'UTR       24284625//24209618//27773535 chr12:54763397-54763398(-) m6A 3'UTR       24284625//27773535 chr12:54763418-54763419(-) m6A 3'UTR       24284625//27773535 chr12:54763595-54763596(-) m6A 3'UTR       24284625//27773535 chr12:54763613-54763614(-) m6A 3'UTR       24284625//27773535 chr12:54763633-54763634(-) m6A 3'UTR       24284625//27773535 chr12:54763641-54763642(-) m6A 3'UTR       24284625//25456834//27773535 chr12:54763671-54763672(-) m6A 3'UTR//exon       24284625//25456834//27773535 chr12:54763719-54763720(-) m6A 3'UTR//exon       24284625//25456834//27773535 chr12:54763765-54763766(-) m6A 3'UTR//exon       24284625//27773535 chr12:54763834-54763835(-) m6A 3'UTR//exon       27773535 chr12:54763853-54763854(-) m6A 3'UTR//exon       - chr12:54763992-54763993(-) m6A 3'UTR//exon       24284625//24981863 chr12:54764026-54764027(-) m6A 3'UTR//exon       24284625//24981863//27773535 chr12:54764063-54764064(-) m6A 3'UTR//CDS//exon       24284625//24981863//27371828 chr12:54764074-54764075(-) m6A 3'UTR//CDS//exon       24284625//24981863//27371828 chr12:54764084-54764085(-) m6A 3'UTR//CDS//exon       24284625//24981863//27371828 chr12:54764123-54764124(-) m6A 3'UTR//CDS//exon       24284625//24981863 chr12:54765382-54765383(-) m6A 3'UTR//CDS//exon//intron       27371828 chr12:54765415-54765416(-) m6A CDS//exon//intron       27371828 chr12:54765452-54765453(-) m6A CDS//exon//intron       27371828 chr12:54765482-54765483(-) m6A CDS//exon//intron       27371828 chr12:54767812-54767813(-) m6A CDS//exon       24981863 chr12:54767820-54767821(-) m6A CDS//exon       24981863 chr12:54767849-54767850(-) m6A CDS//exon       24981863 chr12:54778281-54778282(-) m6A CDS       24981863//27371828//27773536 chr12:54778418-54778419(-) m6A 5'UTR//intron       27371828 chr12:54779544-54779545(-) m6A 5'UTR//intron       24981863 chr12:54785051-54785052(-) m6A 5'UTR       24981863 chr12:54785066-54785067(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF385A	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H7-3p
Interactor2: ZNF385A

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg