Basic Information:

  VIRBase ID:  

VHID00102816

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-5p:  MIMAT0012595          HAPLN4:  NM_023002     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H7-5p	HAPLN4
miRBase Accession/Entrez ID	MIMAT0012595	404037
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BRAL2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HAPLN4	chr19:19366623-19366624(-) m6A 3'UTR       25456834 chr19:19366643-19366644(-) m6A 3'UTR       25456834 chr19:19366722-19366723(-) m6A 3'UTR       25456834 chr19:19366746-19366747(-) m6A 3'UTR       25456834 chr19:19366759-19366760(-) m6A 3'UTR       25456834 chr19:19366799-19366800(-) m6A 3'UTR       25456834 chr19:19366945-19366946(-) m6A 3'UTR       27773535 chr19:19367013-19367014(-) m6A 3'UTR       25456834 chr19:19367063-19367064(-) m6A 3'UTR       25456834 chr19:19367132-19367133(-) m6A 3'UTR       25456834 chr19:19367142-19367143(-) m6A 3'UTR       25456834//24981863 chr19:19367234-19367235(-) m6A 3'UTR       25456834//24981863 chr19:19367251-19367252(-) m6A 3'UTR       25456834//24981863 chr19:19367280-19367281(-) m6A 3'UTR       25456834//24981863 chr19:19367317-19367318(-) m6A 3'UTR       25456834//24981863 chr19:19367347-19367348(-) m6A 3'UTR       25456834//24981863 chr19:19367370-19367371(-) m6A 3'UTR       25456834//24981863 chr19:19367398-19367399(-) m6A 3'UTR       25456834//24981863 chr19:19367432-19367433(-) m6A 3'UTR       25456834//24981863 chr19:19367466-19367467(-) m6A 3'UTR       25456834 chr19:19367470-19367471(-) m6A 3'UTR       25456834//24981863 chr19:19367585-19367586(-) m6A 3'UTR       25456834//27773535 chr19:19367657-19367658(-) m6A 3'UTR       27773535 chr19:19367789-19367790(-) m6A 3'UTR       27773535 chr19:19367814-19367815(-) m6A 3'UTR       27773535 chr19:19367932-19367933(-) m6A 3'UTR       24981863 chr19:19368033-19368034(-) m6A 3'UTR       25456834//24981863 chr19:19368115-19368116(-) m6A 3'UTR       25456834//24981863 chr19:19368124-19368125(-) m6A 3'UTR       25456834//24981863 chr19:19368166-19368167(-) m6A 3'UTR       25456834//24981863 chr19:19368192-19368193(-) m6A 3'UTR       25456834//24981863 chr19:19368197-19368198(-) m6A 3'UTR       25456834//24981863 chr19:19368229-19368230(-) m6A 3'UTR       25456834//24981863 chr19:19368249-19368250(-) m6A 3'UTR       25456834//24981863 chr19:19368285-19368286(-) m6A 3'UTR       25456834//24981863 chr19:19368296-19368297(-) m6A 3'UTR       25456834//24981863 chr19:19368315-19368316(-) m6A 3'UTR       25456834//24981863 chr19:19368333-19368334(-) m6A 3'UTR       25456834//24981863 chr19:19368352-19368353(-) m6A 3'UTR       25456834//24981863 chr19:19368456-19368457(-) m6A 3'UTR       25456834//24981863 chr19:19368475-19368476(-) m6A 3'UTR       25456834//24981863 chr19:19368503-19368504(-) m6A 3'UTR       25456834//24981863 chr19:19368535-19368536(-) m6A 3'UTR       25456834//24981863 chr19:19368609-19368610(-) m6A 3'UTR       25456834//24981863 chr19:19368642-19368643(-) m6A CDS       25456834 chr19:19369477-19369478(-) m6A CDS       25456834 chr19:19369528-19369529(-) m6A CDS       25456834 chr19:19369560-19369561(-) m6A CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HAPLN4	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H7-5p
Interactor2: HAPLN4

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg