Basic Information:

  VIRBase ID:  

VHID00102803

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-5p:  MIMAT0012595          SH2D5:  NM_001103161     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H7-5p	SH2D5
miRBase Accession/Entrez ID	MIMAT0012595	400745
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SH2D5	chr1:21056006(-) A-I      intronic chr1:21051495(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SH2D5	chr1:21046656-21046657(-) m6A 3'UTR//exon       25456834//22608085 chr1:21046690-21046691(-) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:21046730-21046731(-) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:21046747-21046748(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:21046760-21046761(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:21046816-21046817(-) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:21046906-21046907(-) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:21046944-21046945(-) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:21046990-21046991(-) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:21046995-21046996(-) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:21047063-21047064(-) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:21047082-21047083(-) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:21047095-21047096(-) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:21047120-21047121(-) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:21047137-21047138(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:21047189-21047190(-) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr1:21047239-21047240(-) m6A 3'UTR//exon       24284625 chr1:21047254-21047255(-) m6A 3'UTR//exon       24284625 chr1:21047568-21047569(-) m6A 3'UTR//exon       24209618//25456834//24981863//27773536 chr1:21047604-21047605(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773536 chr1:21047638-21047639(-) m6A 3'UTR//exon       24284625//24209618//25456834 chr1:21047672-21047673(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr1:21047834-21047835(-) m6A 3'UTR//exon       24284625//24209618//24981863 chr1:21047987-21047988(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr1:21048092-21048093(-) m6A 3'UTR//exon       25456834//24981863 chr1:21048340-21048341(-) m6A CDS//exon       24284625//25456834//27773536 chr1:21048369-21048370(-) m6A CDS//exon       24284625//25456834//24981863 chr1:21048390-21048391(-) m6A CDS//exon       24284625//25456834//24981863 chr1:21048444-21048445(-) m6A CDS//exon       24284625//25456834 chr1:21050145-21050146(-) m6A CDS//exon       - chr1:21050605-21050606(-) m6A CDS//exon       24284625 chr1:21057265-21057266(-) m6A 5'UTR//intron       - chr1:21057320-21057321(-) m6A 5'UTR//intron       - chr1:21057330-21057331(-) m6A 5'UTR//intron       - chr1:21057550-21057551(-) m6A 5'UTR//intron       25456834 chr1:21057562-21057563(-) m6A 5'UTR//intron       25456834 chr1:21057623-21057624(-) m6A 5'UTR//intron       25456834 chr1:21057636-21057637(-) m6A 5'UTR//intron       25456834 chr1:21057647-21057648(-) m6A 5'UTR//intron       25456834 chr1:21057657-21057658(-) m6A 5'UTR//intron       25456834 chr1:21057964-21057965(-) m6A 5'UTR//intron       25456834 chr1:21057978-21057979(-) m6A 5'UTR//intron       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SH2D5	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H7-5p
Interactor2: SH2D5

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg