Basic Information:

  VIRBase ID:  

VHID00102321

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H7-5p:  MIMAT0012595          MBD6:  NM_052897     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H7-5p	MBD6
miRBase Accession/Entrez ID	MIMAT0012595	114785
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MBD6	chr12:57916781-57916782(+) m6A 5'UTR//intron       24284625 chr12:57917842-57917843(+) m6A 5'UTR//exon//intron       - chr12:57917847-57917848(+) m6A 5'UTR//exon//intron       - chr12:57917899-57917900(+) m6A 5'UTR//intron       - chr12:57919251-57919252(+) m6A CDS//intron       24981863 chr12:57919520-57919521(+) m6A CDS//intron       24284625//24209618//24981863 chr12:57919854-57919855(+) m6A CDS//intron       24284625 chr12:57919897-57919898(+) m6A CDS//intron       24284625 chr12:57920001-57920002(+) m6A CDS//intron       24284625 chr12:57920140-57920141(+) m6A CDS       - chr12:57921991-57921992(+) m6A CDS       24284625 chr12:57922114-57922115(+) m6A CDS       24284625//24981863 chr12:57922205-57922206(+) m6A CDS       - chr12:57922225-57922226(+) m6A CDS       - chr12:57922250-57922251(+) m6A CDS       - chr12:57922335-57922336(+) m6A CDS       - chr12:57922739-57922740(+) m6A CDS       24284625 chr12:57922760-57922761(+) m6A CDS       24284625 chr12:57922773-57922774(+) m6A CDS       24284625 chr12:57922991-57922992(+) m6A CDS       24284625 chr12:57923004-57923005(+) m6A CDS       24284625 chr12:57923105-57923106(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr12:57923264-57923265(+) Y 3'UTR//intron       26075521 chr12:57923413-57923414(+) m6A 3'UTR//intron       27773535 chr12:57923569-57923570(+) m6A 3'UTR//intron       - chr12:57923820-57923821(+) m6A 3'UTR       27773535 chr12:57923825-57923826(+) m6A 3'UTR       27773535 chr12:57923891-57923892(+) m6A 3'UTR       27773535 chr12:57923925-57923926(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MBD6	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H7-5p
Interactor2: MBD6

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg